SecReT6
I. Summary
SecReT6 ID205 insolico
StrainEnterobacter sp. 638
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_009436
Location3147681..3162212
Comment
FunctionN/A
T6SS TypeType i; subtype i2
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number000021100
ComponentTssGTssJTssKTssM
Number0011
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1Ent638_29013143034..3144236 [-], 1203146312543phage integrase family protein 
2Ent638_29023144337..3145539 [-], 1203146312544phage integrase family protein 
3Ent638_29033145903..3146151 [-], 249146312545hypothetical protein 
4Ent638_29043146158..3146364 [-], 207146312546phage transcriptional regulator, AlpA 
5Ent638_29053146488..3147342 [-], 855146312547hypothetical protein 
6Ent638_29063147681..3149096 [-], 1416146312548ImpA domain-containing protein  TssA
7Ent638_29073149639..3150793 [-], 1155146312549hypothetical protein 
8Ent638_29083150986..3151657 [-], 672146312550hypothetical protein 
9Ent638_29093151666..3152049 [-], 384146312551hypothetical protein 
10Ent638_29103152243..3154618 [-], 2376146312552ImpA domain-containing protein  TssA
11Ent638_29113154619..3157903 [-], 3285146312553ImcF domain-containing protein  TssM
12Ent638_29133158097..3158642 [-], 546146312554hypothetical protein 
13Ent638_29143158766..3160115 [-], 1350146312555hypothetical protein  TssK
14Ent638_29153160133..3161740 [-], 1608146312556hypothetical protein  TssC
15Ent638_29163161715..3162212 [-], 498146312557hypothetical protein  TssB
16Ent638_29173164163..3165080 [+], 918146312558lipid A biosynthesis palmitoleoyl acyltransferase 
17Ent638_29183165569..3166804 [-], 1236146312559aminotransferase 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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