SecReT6
I. Summary
SecReT6 ID209 insolico
StrainAcidiphilium cryptum JF-5
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_009484
Location2298110..2308746
Comment
FunctionN/A
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number001100000
ComponentTssGTssJTssKTssM
Number0111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1Acry_20832293417..2294679 [+], 1263148261074paraquat-inducible protein A 
2Acry_20842294672..2296297 [+], 1626148261075hypothetical protein 
3Acry_20852296297..2296851 [+], 555148261076hypothetical protein 
4Acry_20862296859..2297578 [-], 720148261077protein phosphatase 2C domain-containing protein 
5Acry_20872297575..2298105 [-], 531148261078hypothetical protein 
6Acry_20882298110..2301637 [-], 3528148261079ImcF domain-containing protein  TssM
7Acry_20892301634..2303004 [-], 1371148261080OmpA/MotB domain-containing protein  TssL
8Acry_20902303015..2304346 [-], 1332148261081hypothetical protein  TssK
9Acry_20912304353..2304823 [-], 471148261082hypothetical protein  TssJ
10Acry_20922304820..2306211 [-], 1392148261083FHA domain-containing protein  Fha
11Acry_20932306208..2306789 [-], 582148261084hypothetical protein 
12Acry_20942306806..2308746 [-], 1941148261085Rhs element Vgr protein  TssI
13Acry_20952309099..2310877 [+], 1779148261086polypeptide-transport-associated domain-containing protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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