SecReT6
I. Summary
SecReT6 ID240 insolico
StrainBurkholderia multivorans ATCC 17616
Repliconchromosome II [Browse all T6SS(s) in this replicon]
AccessionNC_010086
Location21845..39468
Comment
FunctionN/A
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number001100001
ComponentTssGTssJTssKTssM
Number0001
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1Bmul_317417632..18885 [+], 1254161519723squalene-associated FAD-dependent desaturase 
2Bmul_317518897..20870 [+], 1974161519724squalene-hopene cyclase 
3Bmul_317620876..21580 [+], 705161519725hypothetical protein 
4Bmul_317721845..23809 [+], 1965161519726type VI secretion protein  TssF
5Bmul_317823880..29825 [+], 5946161519727ImpA family type VI secretion-associated protein  TssI
6Bmul_317932441..32737 [+], 297161519728hypothetical protein 
7Bmul_318034280..34534 [+], 255161519729hypothetical protein  PAAR
8Bmul_318134545..35486 [+], 942161519730hypothetical protein  TssL
9Bmul_318235515..39468 [+], 3954161519731type VI secretion protein IcmF  TssM
10Bmul_318339498..40511 [-], 1014161519732VacJ family lipoprotein 
11Bmul_318440504..43137 [-], 2634161519733hopanoid biosynthesis associated RND transporter like protein HpnN 
12Bmul_318543456..44052 [+], 597161519734toluene tolerance family protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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