SecReT6
I. Summary
SecReT6 ID289 insolico
StrainBurkholderia multivorans ATCC 17616
Repliconchromosome II [Browse all T6SS(s) in this replicon]
AccessionNC_010805
Location1578848..1609553
Comment
FunctionN/A
T6SS TypeType i; subtype i3
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number112111111
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1BMULJ_04573 (fabG)1574128..1574889 [-], 7621893533333-oxoacyl-ACP reductase 
2BMULJ_045741574998..1575909 [+], 912189353334LysR family transcriptional regulator 
3BMULJ_045751575934..1576587 [-], 654189353335transcriptional regulatory protein 
4BMULJ_04576 (ndh)1576735..1578027 [+], 1293189353336NADH dehydrogenase 
5BMULJ_045771578071..1578469 [+], 399189353337hypothetical protein 
6BMULJ_045781578848..1580065 [-], 1218189353338OmpA/MotB family outer membrane protein  TssL
7BMULJ_045791580085..1584185 [-], 4101189353339hypothetical protein  TssM
8BMULJ_045801584211..1585509 [-], 1299189353340hypothetical protein  TssL
9BMULJ_045811585506..1585784 [-], 279189353341hypothetical protein  PAAR
10BMULJ_045821585853..1586773 [-], 921189353342hypothetical protein 
11BMULJ_045831586849..1587703 [-], 855189353343hypothetical protein 
12BMULJ_045841587866..1588807 [-], 942189353344hypothetical protein 
13BMULJ_045851588809..1591367 [-], 2559189353345hypothetical protein 
14BMULJ_045861591364..1592206 [-], 843189353346hypothetical protein 
15BMULJ_045871592216..1594753 [-], 2538189353347Rhs element Vgr protein  TssI
16BMULJ_045881594815..1596065 [-], 1251189353348hypothetical protein  TssK
17BMULJ_045891596085..1596831 [-], 747189353349ISBmu5a transposase 
18BMULJ_045901596921..1597448 [-], 528189353350ISBmu5a transposase 
19BMULJ_045911597643..1598146 [-], 504189353351lipoprotein  TssJ
20BMULJ_045921598225..1598710 [-], 486189353352hypothetical protein  TssD
21BMULJ_045931598803..1600296 [-], 1494189353353hypothetical protein  TssC
22BMULJ_045941600324..1600863 [-], 540189353354hypothetical protein  TssB
23BMULJ_045951600900..1603581 [-], 2682189353355ATP-dependent Clp protease ATP-binding subunit  TssH
24BMULJ_045961604120..1604764 [+], 645189353356hypothetical protein 
25BMULJ_045971604874..1605440 [+], 567189353357hypothetical protein  TssE
26BMULJ_045981605476..1607365 [+], 1890189353358hypothetical protein  TssF
27BMULJ_045991607365..1608438 [+], 1074189353359hypothetical protein  TssG
28BMULJ_046001608435..1609553 [+], 1119189353360ImpA-like protein  TssA
29BMULJ_04601 (ssuB)1609604..1610956 [-], 1353189353361sulfonate/nitrate/taurine transporter ATP-binding protein 
30BMULJ_04602 (ssuC)1610968..1612719 [-], 1752189353362sulfonate/nitrate/taurine transporter permease 
31BMULJ_046031613005..1613943 [+], 939189353363metallophosphoesterase 
32BMULJ_046041613961..1614302 [+], 342189353364plastocyanin 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 







Homology Effector list
SciK

Effector identified
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  Homolog
1BMULJ_045921598225..1598710 [-], 486189353352hypothetical protein SciK

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Proteins        Genes
N/A
N/A