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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Pvag_1018 (guaa1) | 1068653..1069378 [+], 726 | 308186529 | GMP synthase | |
2 | Pvag_1019 | 1069366..1069929 [-], 564 | 308186530 | trans-aconitate 2-methyltransferase | |
3 | Pvag_1020 (aldB) | 1070163..1071683 [+], 1521 | 308186531 | aldehyde dehydrogenase | |
4 | Pvag_1021 | 1072750..1073346 [+], 597 | 308186532 | type VI secretion system-associated hypothetical protein | |
5 | Pvag_1022 | 1073370..1073867 [+], 498 | 308186533 | type VI secretion system, core protein | TssJ |
6 | Pvag_1023 | 1073873..1075213 [+], 1341 | 308186534 | type VI secretion system, core protein | TssK |
7 | Pvag_1024 | 1075231..1076469 [+], 1239 | 308186535 | type VI secretion system, core protein | TssL |
8 | Pvag_1025 | 1076473..1080102 [+], 3630 | 308186536 | type VI secretion system, core protein | TssM |
9 | Pvag_1026 | 1080117..1080833 [+], 717 | 308186537 | type VI secretion system-associated hypothetical protein | |
10 | Pvag_1027 | 1080844..1081866 [+], 1023 | 308186538 | type VI secretion system, core protein | TssA |
11 | Pvag_1028 | 1081946..1082479 [+], 534 | 308186539 | type VI secretion system, core protein | TssB |
12 | Pvag_1029 | 1082476..1083975 [+], 1500 | 308186540 | type VI secretion system, core protein | TssC |
13 | Pvag_1030 | 1084021..1084281 [+], 261 | 308186541 | hypothetical protein | |
14 | Pvag_1031 (hcp) | 1084523..1085005 [+], 483 | 308186542 | type VI secretion system, effector protein hcp | TssD |
15 | Pvag_1032 | 1085110..1086102 [+], 993 | 308186543 | type VI secretion system-associated hypothetical protein | |
16 | Pvag_1033 | 1086655..1087038 [+], 384 | 308186544 | type VI secretion system-associated hypothetical protein | |
17 | Pvag_1034 | 1086992..1087450 [+], 459 | 308186545 | type VI secretion system-associated hypothetical protein | |
18 | Pvag_1035 | 1087748..1089607 [+], 1860 | 308186546 | type VI secretion system, core protein | Fha |
19 | Pvag_1036 | 1089604..1090395 [+], 792 | 308186547 | type VI secretion system, Serine/threonine protein phosphatase | |
20 | Pvag_1037 | 1090322..1091383 [+], 1062 | 308186548 | type VI secretion system-associated hypothetical protein | |
21 | Pvag_1038 | 1091400..1092227 [+], 828 | 308186549 | type VI secretion system-associated hypothetical protein | TagJ |
22 | Pvag_1039 | 1092217..1092792 [+], 576 | 308186550 | type VI secretion system, core protein | TssE |
23 | Pvag_1040 | 1092795..1094666 [+], 1872 | 308186551 | type VI secretion system, core protein | TssF |
24 | Pvag_1041 | 1094525..1095709 [+], 1185 | 308186552 | type VI secretion system, core protein | TssG |
25 | Pvag_1042 (clpV) | 1095764..1098373 [+], 2610 | 308186553 | type VI secretion system, core protein ATPase | TssH |
26 | Pvag_1043 | 1098401..1099903 [+], 1503 | 308186554 | type VI secretion system, serine- threonine protein kinase | |
27 | Pvag_1044 (vgrS) | 1099920..1102136 [+], 2217 | 308186555 | type VI secretion system, effector protein vgrS | TssI |
28 | Pvag_1045 | 1102497..1103285 [+], 789 | 308186556 | hypothetical protein | |
29 | Pvag_1046 | 1104441..1105286 [+], 846 | 308186557 | hypothetical protein | |
30 | Pvag_1047 | 1105367..1105744 [+], 378 | 308186558 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein