SecReT6
I. Summary
SecReT6 ID415 insolico
StrainTaylorella equigenitalis MCE9
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_014914
Location730792..760855
Comment
FunctionN/A
T6SS TypeType i; subtype i3
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111111111
ComponentTssGTssJTssKTssM
Number0111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1TEQUI_0704725973..727445 [+], 1473319778872Potassium uptake protein TrkH 
2TEQUI_0705727452..727922 [-], 471319778873tRNA (cytosine34-2'-O-)-methyltransferase 
3TEQUI_0706727925..728470 [-], 546319778874phosphoribosyltransferase 
4TEQUI_0707728674..729597 [+], 924319778875Biotin synthesis protein bioC 
5TEQUI_0708730792..733617 [+], 2826319778876ClpB protein  TssH
6TEQUI_0709733765..736416 [-], 2652319778877hypothetical protein 
7TEQUI_0710736531..737007 [-], 477319778878lipoprotein 
8TEQUI_0711737237..737746 [+], 510319778879lipoprotein  TssJ
9TEQUI_0712737759..739111 [+], 1353319778880Uncharacterized protein ImpJ/VasE  TssK
10TEQUI_0713739119..740456 [+], 1338319778881Outer membrane protein ImpK/VasF, OmpA/MotB domain protein  TssL
11TEQUI_0714740468..744094 [+], 3627319778882IcmF-related protein  TssM
12TEQUI_0715744096..744818 [+], 723319778883Protein phosphatase ImpM 
13TEQUI_0716744824..747520 [+], 2697319778884hypothetical protein 
14TEQUI_0717747609..748670 [+], 1062319778885Uncharacterized protein ImpA  TssA
15TEQUI_0718748708..749241 [+], 534319778886Uncharacterized protein ImpB  TssB
16TEQUI_0719749250..750743 [+], 1494319778887Uncharacterized protein ImpC  TssC
17TEQUI_0720750811..751296 [+], 486319778888Uncharacterized protein ImpD  TssD
18TEQUI_0721751384..752217 [+], 834319778889Protein of avirulence locus ImpE  TagJ
19TEQUI_0722752228..752791 [+], 564319778890Uncharacterized protein ImpF  TssE
20TEQUI_0723752791..754686 [+], 1896319778891Protein ImpG/VasA  TssF
21TEQUI_0724754766..755470 [+], 705319778892hypothetical protein 
22TEQUI_0725755548..758031 [-], 2484319778893TonB-dependent receptor 
23TEQUI_0726758296..758916 [+], 621319778894hypothetical protein 
24TEQUI_0727759311..760855 [+], 1545319778895VgrG protein  TssI
25TEQUI_0728760881..761747 [+], 867319778896hypothetical protein 
26TEQUI_0729761760..764426 [+], 2667319778897hypothetical protein 
27TEQUI_0730764429..765505 [+], 1077319778898hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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