SecReT6
I. Summary
SecReT6 ID425 insolico
StrainAcidiphilium multivorum AIU301
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_015186
Location2579930..2590566
Comment
FunctionN/A
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number001100000
ComponentTssGTssJTssKTssM
Number0111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1ACMV_232902575237..2576499 [+], 1263326404476hypothetical protein 
2ACMV_233002576492..2578117 [+], 1626326404477hypothetical protein 
3ACMV_233102578117..2578671 [+], 555326404478hypothetical protein 
4ACMV_233202578679..2579398 [-], 720326404479putative protein phosphatase 
5ACMV_233302579395..2579925 [-], 531326404480hypothetical protein 
6ACMV_233402579930..2583457 [-], 3528326404481hypothetical protein  TssM
7ACMV_233502583454..2584824 [-], 1371326404482hypothetical protein  TssL
8ACMV_233602584835..2586166 [-], 1332326404483hypothetical protein  TssK
9ACMV_233702586173..2586643 [-], 471326404484hypothetical protein  TssJ
10ACMV_233802586640..2588031 [-], 1392326404485hypothetical protein  Fha
11ACMV_233902588028..2588609 [-], 582326404486hypothetical protein 
12ACMV_234002588626..2590566 [-], 1941326404487hypothetical protein  TssI
13ACMV_234102590970..2592697 [+], 1728326404488hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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