SecReT6
I. Summary
SecReT6 ID433 insolico
StrainBurkholderia gladioli BSR3
Repliconchromosome I [Browse all T6SS(s) in this replicon]
AccessionNC_015381
Location446062..466180
Comment
FunctionN/A
T6SS TypeType i; subtype i4b
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111011111
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1bgla_1g04020441401..442651 [+], 1251330815347transposase mutator type 
2bgla_1g04040443949..444392 [+], 444330815348YiaAB two helix membrane protein 
3bgla_1g04050444781..445965 [+], 1185330815349Diguanylate cyclase 
4bgla_1g04060446062..446847 [-], 786330815350OmpA family protein  TssL
5bgla_1g04070446844..448190 [-], 1347330815351hypothetical protein  TssK
6bgla_1g04080448291..448908 [-], 618330815352Putative lipoprotein  TssJ
7bgla_1g04090449282..449953 [+], 672330815353TPR repeat protein 
8bgla_1g04100449990..450508 [+], 519330815354hypothetical protein  TssB
9bgla_1g04110450524..452014 [+], 1491330815355hypothetical protein  TssC
10bgla_1g04120452091..452594 [+], 504330815356putative hemolysin-coregulated protein  TssD
11bgla_1g04130452683..453165 [+], 483330815357hypothetical protein  TssE
12bgla_1g04140453243..455081 [+], 1839330815358hypothetical protein  TssF
13bgla_1g04150455045..456142 [+], 1098330815359hypothetical protein  TssG
14bgla_1g04160456219..458894 [+], 2676330815360ClpA/B type protease  TssH
15bgla_1g04170459032..460186 [+], 1155330815361hypothetical protein  TssA
16bgla_1g04180460280..461317 [-], 1038330815362OmpA/MotB protein  TagL
17bgla_1g04190461322..462308 [-], 987330815363hypothetical protein 
18bgla_1g04200462305..466180 [-], 3876330815364hypothetical protein  TssM
19bgla_1g04210466457..467308 [-], 852330815365Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin 
20bgla_1g04220467432..468487 [+], 1056330815366hypothetical protein 
21bgla_1g04230468931..469962 [+], 1032330815367Mg2 and Co2 transporter 
22bgla_1g04240470047..470199 [-], 153330815368hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 







Homology Effector list
BCAL0343

Effector identified
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  Homolog
1bgla_1g04120452091..452594 [+], 504330815356putative hemolysin-coregulated protein BCAL0343

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Proteins        Genes
N/A
N/A