SecReT6
I. Summary
SecReT6 ID436 insolico
StrainPusillimonas sp. T7-7
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_015458
Location399996..423544
Comment
FunctionN/A
T6SS TypeType i; subtype i3
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111111111
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1PT7_0337397006..397704 [+], 699332283590aquaporin Z 
2PT7_0338397783..398376 [-], 594332283591DSBA oxidoreductase 
3PT7_0339398409..398915 [-], 507332283592hypothetical protein 
4PT7_0340398997..399131 [-], 135332283593hypothetical protein 
5PT7_0341399130..399750 [+], 621332283594lipoprotein 
6PT7_0342399996..401048 [+], 1053332283595hypothetical protein  TssA
7PT7_0343401109..401660 [+], 552332283596hypothetical protein  TssB
8PT7_0344401676..403187 [+], 1512332283597hypothetical protein  TssC
9PT7_0345403293..403763 [+], 471332283598hypothetical protein  TssD
10PT7_0346403856..404395 [+], 540332283599hypothetical protein  TssE
11PT7_0347404395..406284 [+], 1890332283600hypothetical protein  TssF
12PT7_0348406294..407373 [+], 1080332283601hypothetical protein  TssG
13PT7_0349407370..410054 [+], 2685332283602ATPase with chaperone activity  TssH
14PT7_0350410039..410773 [-], 735332283603hypothetical protein  Fha
15PT7_0351410770..411162 [-], 393332283604lipoprotein 
16PT7_0352411380..411937 [+], 558332283605lipoprotein  TssJ
17PT7_0353411987..413318 [+], 1332332283606hypothetical protein  TssK
18PT7_0354413315..414646 [+], 1332332283607hypothetical protein  TssL
19PT7_0355414643..418257 [+], 3615332283608hypothetical protein  TssM
20PT7_0356418264..418995 [+], 732332283609hypothetical protein 
21PT7_0357418992..420362 [+], 1371332283610hypothetical protein 
22PT7_0358420500..421159 [+], 660332283611hypothetical protein 
23PT7_0359421196..423544 [+], 2349332283612hypothetical protein  TssI
24PT7_0360423603..424079 [+], 477332283613hypothetical protein 
25PT7_0361424102..426729 [+], 2628332283614hypothetical protein 
26PT7_0362426726..427799 [+], 1074332283615hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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