SecReT6
I. Summary
SecReT6 ID456 insolico
StrainEnterobacter asburiae LF7a
Repliconplasmid pENTAS01 [Browse all T6SS(s) in this replicon]
AccessionNC_015963
Location122043..139735
Comment
FunctionN/A
T6SS TypeType i; subtype i4b
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number101111111
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1Entas_4609117178..117948 [-], 771345301716Pili assembly chaperone 
2Entas_4610118136..118687 [-], 552345301717Fimbrial protein domain-containing protein 
3Entas_4611118760..119281 [-], 522345301718type I fimbrial protein, A chain 
4Entas_4612119778..120362 [-], 585345301719integrase family protein 
5Entas_4613120941..122056 [-], 1116345301720hypothetical protein 
6Entas_4614122043..124577 [-], 2535345301721type VI secretion ATPase, ClpV1 family  TssH
7Entas_4615124597..128031 [-], 3435345301722hypothetical protein  TssM
8Entas_4616128040..128648 [-], 609345301723DotU family type IV / VI secretion system protein  TssL
9Entas_4617128651..130024 [-], 1374345301724type VI secretion protein  TssK
10Entas_4618130014..130673 [-], 660345301725hypothetical protein  TssJ
11Entas_4619130670..131734 [-], 1065345301726ImpA family type VI secretion-associated protein  TssA
12Entas_4620131738..132037 [-], 300345301727PAAR repeat-containing protein  PAAR
13Entas_4621132207..134048 [-], 1842345301728type VI secretion system Vgr family protein  TssI
14Entas_4622134051..135004 [-], 954345301729type VI secretion protein  TssG
15Entas_4623134995..136791 [-], 1797345301730type VI secretion protein  TssF
16Entas_4624136784..137197 [-], 414345301731gpW/GP25 family protein  TssE
17Entas_4625137251..137733 [-], 483345301732hypothetical protein 
18Entas_4626137758..139239 [-], 1482345301733EvpB family type VI secretion protein  TssC
19Entas_4627139229..139735 [-], 507345301734type VI secretion protein  TssB
20Entas_4629140533..141273 [+], 741345301735integrase family protein 
21Entas_4630141527..142537 [-], 1011345301736initiator RepB protein 
22Entas_4631143294..144460 [+], 1167345301737Cobyrinic acid ac-diamide synthase 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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