SecReT6
I. Summary
SecReT6 ID462 insolico
StrainTaylorella asinigenitalis MCE3
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_016043
Location80496..119795
Comment
FunctionN/A
T6SS TypeType i; subtype i3
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111111111
ComponentTssGTssJTssKTssM
Number1111
Click the above image to have a larger view
III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1TASI_007675506..76882 [+], 1377348589428Trk system potassium uptake protein TrkA 
2TASI_007776891..78363 [+], 1473348589429potassium uptake protein TrkH 
3TASI_007878367..78837 [-], 471348589430tRNA (cytosine34-2'-O-)-methyltransferase 
4TASI_007978840..79403 [-], 564348589431Competence protein F-like protein, phosphoribosyltransferase domain-containing protein 
5TASI_008079589..80506 [+], 918348589432biotin synthesis protein bioC 
6TASI_008180496..81725 [-], 1230348589433protein ImpH/VasB  TssG
7TASI_008281875..84721 [+], 2847348589434ClpB protein  TssH
8TASI_008384770..87334 [-], 2565348589435hypothetical protein 
9TASI_008487449..87925 [-], 477348589436putative lipoprotein 
10TASI_008588157..88666 [+], 510348589437putative lipoprotein  TssJ
11TASI_008688679..90028 [+], 1350348589438protein ImpJ/VasE  TssK
12TASI_008790039..91376 [+], 1338348589439outer membrane protein ImpK/VasF  TssL
13TASI_008891553..95014 [+], 3462348589440IcmF-like protein  TssM
14TASI_008995016..95738 [+], 723348589441protein phosphatase ImpM 
15TASI_009095744..98587 [+], 2844348589442hypothetical protein 
16TASI_009198677..99744 [+], 1068348589443protein ImpA  TssA
17TASI_009299782..100315 [+], 534348589444protein ImpB  TssB
18TASI_0093100324..101817 [+], 1494348589445protein ImpC  TssC
19TASI_0094101886..102371 [+], 486348589446protein ImpD  TssD
20TASI_0095102465..103298 [+], 834348589447hypothetical protein  TagJ
21TASI_0096103308..103871 [+], 564348589448protein ImpF  TssE
22TASI_0097103871..105766 [+], 1896348589449protein ImpG/VasA  TssF
23TASI_0098105848..106552 [+], 705348589450hypothetical protein 
24TASI_0099106611..109082 [-], 2472348589451TonB-dependent receptor 
25TASI_0100109477..110064 [+], 588348589452hypothetical protein 
26TASI_0101110664..111317 [+], 654348589453hypothetical protein 
27TASI_0102111314..111934 [+], 621348589454hypothetical protein 
28TASI_0103111983..112603 [+], 621348589455hypothetical protein 
29TASI_0104114045..114698 [+], 654348589456hypothetical protein 
30TASI_0105114695..115315 [+], 621348589457hypothetical protein 
31TASI_0106116547..117191 [+], 645348589458hypothetical protein 
32TASI_0107117188..117808 [+], 621348589459hypothetical protein 
33TASI_0108118242..119795 [+], 1554348589460VgrG protein  TssI
34TASI_0109119810..120703 [+], 894348589461hypothetical protein 
35TASI_0110120716..121609 [+], 894348589462hypothetical protein 
36TASI_0111121621..122511 [+], 891348589463hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

Download FASTA format files
Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






N/A
N/A
N/A