SecReT6
I. Summary
SecReT6 ID504 insolico
StrainTerriglobus saanensis SP1PR4
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_014963
Location1280310..1301694
Comment
FunctionN/A
T6SS TypeType i; subtype i4b
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111111111
ComponentTssGTssJTssKTssM
Number1021
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1AciPR4_10741275725..1278181 [+], 2457320106309serine/threonine protein kinase 
2AciPR4_10751278178..1279482 [+], 1305320106310hypothetical protein 
3AciPR4_10761279479..1280273 [+], 795320106311protein serine/threonine phosphatase 
4AciPR4_10771280310..1283738 [-], 3429320106312ImcF domain-containing protein  TssM
5AciPR4_10781283739..1284455 [-], 717320106313DotU family type IV/VI secretion system protein  TssL
6AciPR4_10791284452..1285807 [-], 1356320106314type VI secretion protein  TssK
7AciPR4_10801286057..1287235 [+], 1179320106315hypothetical protein 
8AciPR4_10811287260..1288630 [-], 1371320106316type VI secretion protein  TssK
9AciPR4_10821288908..1289423 [+], 516320106317type VI secretion protein  TssB
10AciPR4_10831289424..1290923 [+], 1500320106318EvpB tamily type VI secretion protein  TssC
11AciPR4_10841290972..1291463 [+], 492320106319hypothetical protein  TssD
12AciPR4_10851291679..1293571 [+], 1893320106320type VI secretion-associated protein, ImpA family  TssA
13AciPR4_10861293546..1294025 [+], 480320106321type VI secretion system lysozyme-like protein  TssE
14AciPR4_10871294028..1295869 [+], 1842320106322type VI secretion protein  TssF
15AciPR4_10881295833..1296894 [+], 1062320106323type VI secretion protein  TssG
16AciPR4_10891296913..1299576 [+], 2664320106324type VI secretion ATPase, ClpV1 family  TssH
17AciPR4_10901299628..1301694 [+], 2067320106325ImpA family type VI secretion-associated protein  TssI
18AciPR4_10911302023..1303084 [-], 1062320106326NAD-dependent epimerase/dehydratase 
19AciPR4_10921303135..1303434 [-], 300320106327regulatory protein ArsR 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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