SecReT6
I. Summary
SecReT6 ID586 insolico
StrainArcobacter sp. L
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_017192
Location2227432..2251980
Comment
FunctionN/A
T6SS TypeType i; subtype i1
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111211111
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1ABLL_21732222667..2223626 [-], 960384172988hypothetical protein 
2ABLL_21742223635..2224594 [-], 960384172989hypothetical protein 
3ABLL_21752224603..2225556 [-], 954384172990hypothetical protein 
4ABLL_21762225570..2227432 [-], 1863384172991hypothetical protein 
5ABLL_21772227432..2229693 [-], 2262384172992hypothetical protein  TssI
6ABLL_21782229696..2230433 [-], 738384172993protein kinase 
7ABLL_21792230436..2233801 [-], 3366384172994hypothetical protein  TssM
8ABLL_21802233788..2234642 [-], 855384172995hypothetical protein  TssL
9ABLL_21812234653..2235981 [-], 1329384172996hypothetical protein  TssK
10ABLL_21822235971..2236432 [-], 462384172997hypothetical protein  TssJ
11ABLL_21832236444..2237712 [-], 1269384172998hypothetical protein  Fha
12ABLL_21842237717..2237857 [-], 141384172999hypothetical protein 
13ABLL_21852237925..2240363 [-], 2439384173000ATPase  TssH
14ABLL_21862240353..2241345 [-], 993384173001hypothetical protein  TssG
15ABLL_21872241356..2243125 [-], 1770384173002hypothetical protein  TssF
16ABLL_21882243128..2243535 [-], 408384173003hypothetical protein  TssE
17ABLL_21892243538..2245013 [-], 1476384173004hypothetical protein  TssC
18ABLL_21902245023..2245514 [-], 492384173005hypothetical protein  TssB
19ABLL_21912245524..2246981 [-], 1458384173006hypothetical protein  TssA
20ABLL_21922247153..2247929 [+], 777384173007hypothetical protein 
21ABLL_21932247946..2248494 [+], 549384173008hypothetical protein 
22ABLL_21942248556..2249080 [+], 525384173009hypothetical protein  TssD
23ABLL_21952249134..2251980 [+], 2847384173010hypothetical protein  TssI
24ABLL_21962251980..2253017 [+], 1038384173011putative chitinase 
25ABLL_21972253019..2254122 [+], 1104384173012hypothetical protein 
26ABLL_21982254123..2254800 [+], 678384173013hypothetical protein 
27ABLL_21992254973..2256058 [+], 1086384173014putrescine/spermidine ABC transporter ATP-binding component 
28ABLL_22002256051..2256902 [+], 852384173015putrescine/spermidine ABC transporter permease component 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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