SecReT6
I. Summary
SecReT6 ID655 insolico
StrainEscherichia blattae DSM 4481
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_017910
Location1179502..1226202
Comment
FunctionN/A
T6SS TypeType i; subtype i2
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111211101
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1EBL_c114601174993..1175994 [+], 1002387888463polysulfide reductase-like protein 
2EBL_c114701175987..1179058 [+], 3072387888464putative molybdopterin oxidoreductase family protein 
3EBL_c114801179502..1179999 [+], 498387888465hypothetical protein  TssB
4EBL_c114901180039..1181580 [+], 1542387888466hypothetical protein  TssC
5EBL_c115001181599..1182948 [+], 1350387888467hypothetical protein  TssK
6EBL_c115101182945..1183697 [+], 753387888468hypothetical protein  TssL
7EBL_c115201183697..1185379 [+], 1683387888469putative OmpA family protein  TagL
8EBL_c115301185384..1185875 [+], 492387888470hypothetical protein  TssD
9EBL_c115401186153..1188798 [+], 2646387888471hypothetical protein  TssH
10EBL_c115501188798..1191152 [+], 2355387888472VGR-related protein  TssI
11EBL_c115601191164..1193449 [+], 2286387888473hypothetical protein 
12EBL_c115701193446..1193820 [+], 375387888474hypothetical protein 
13EBL_c115801193997..1194488 [+], 492387888475hypothetical protein 
14EBL_c115901195042..1195368 [+], 327387888476hypothetical protein 
15EBL_c116001195406..1195672 [+], 267387888477putative tansposase 
16EBL_c116101195693..1196493 [+], 801387888478integrase-like protein 
17EBL_c116201196569..1197180 [+], 612387888479hypothetical protein 
18EBL_c116301197298..1199793 [+], 2496387888480hypothetical protein 
19EBL_c116401199790..1200644 [+], 855387888481hypothetical protein 
20EBL_c116501201088..1201531 [+], 444387888482hypothetical protein 
21EBL_c116601201832..1202617 [+], 786387888483hypothetical protein 
22EBL_c116701202893..1205220 [+], 2328387888484hypothetical protein 
23EBL_c116801205245..1205994 [+], 750387888485hypothetical protein 
24EBL_c116901206119..1206469 [+], 351387888486hypothetical protein 
25EBL_c117001206453..1207241 [+], 789387888487hypothetical protein 
26EBL_c117101207389..1207640 [+], 252387888488hypothetical protein 
27EBL_c117201207670..1208356 [+], 687387888489hypothetical protein 
28EBL_c117301208460..1209839 [+], 1380387888490hypothetical protein 
29EBL_c117401209870..1210622 [+], 753387888491hypothetical protein 
30EBL_c117501210651..1210917 [+], 267387888492hypothetical protein 
31EBL_c117601211075..1211896 [+], 822387888493hypothetical protein 
32EBL_c117701212067..1212447 [+], 381387888494hypothetical protein 
33EBL_c117801212784..1213671 [+], 888387888495hypothetical protein 
34EBL_c117901213976..1215136 [+], 1161387888496hypothetical protein 
35EBL_c118001215163..1218534 [+], 3372387888497IcmF-like protein  TssM
36EBL_c118101218535..1220154 [+], 1620387888498ImpA-related protein  TssA
37EBL_c118201220231..1222000 [+], 1770387888499hypothetical protein  TssF
38EBL_c118301221964..1223043 [+], 1080387888500hypothetical protein  TssG
39EBL_c118401223106..1223633 [+], 528387888501hypothetical protein  TssJ
40EBL_c118501223638..1226202 [+], 2565387888502VGR-related protein  TssI
41EBL_c118601226199..1227752 [+], 1554387888503hypothetical protein 
42EBL_c118701227752..1228894 [+], 1143387888504hypothetical protein 
43EBL_c118801229003..1229344 [+], 342387888505hypothetical protein 
44EBL_c118901229354..1230583 [+], 1230387888506hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 







Homology Effector list
EC042_4529

Effector identified
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  Homolog
1EBL_c115301185384..1185875 [+], 492387888470hypothetical protein EC042_4529

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Proteins        Genes
N/A
N/A