SecReT6
I. Summary
SecReT6 ID680 insolico
StrainTaylorella equigenitalis ATCC 35865
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_018108
Location80612..118897
Comment
FunctionN/A
T6SS TypeType i; subtype i3
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111111111
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1KUI_0076 (trkA)75655..77031 [+], 1377397661087Trk system potassium uptake protein 
2KUI_0077 (trkH)77040..78512 [+], 1473397661088Trk system potassium uptake protein 
3KUI_007878519..78989 [-], 471397661089rRNA methylase 
4KUI_007978992..79693 [-], 702397661090putative phosphoribosyltransferase protein 
5KUI_008079735..80664 [+], 930397661091putative SAM-dependent methyltransferase 
6KUI_008180612..81715 [-], 1104397661092hypothetical protein  TssG
7KUI_008281859..84684 [+], 2826397661093Type VI secretion ClpV1 ATPase  TssH
8KUI_008384832..87483 [-], 2652397661094FHA domain-containing protein 
9KUI_008487598..88074 [-], 477397661095putative lipoprotein 
10KUI_008588304..88813 [+], 510397661096putative lipoprotein  TssJ
11KUI_008688826..90178 [+], 1353397661097hypothetical protein  TssK
12KUI_008790186..91523 [+], 1338397661098OmpA-family protein  TssL
13KUI_008891535..95161 [+], 3627397661099hypothetical protein  TssM
14KUI_008995163..95885 [+], 723397661100hypothetical protein 
15KUI_009095891..98641 [+], 2751397661101hypothetical protein 
16KUI_009198730..99791 [+], 1062397661102hypothetical protein  TssA
17KUI_009299829..100362 [+], 534397661103hypothetical protein  TssB
18KUI_0093100371..101864 [+], 1494397661104hypothetical protein  TssC
19KUI_0094101932..102417 [+], 486397661105hypothetical protein  TssD
20KUI_0095102505..103338 [+], 834397661106ImpE-like protein  TagJ
21KUI_0096103349..103912 [+], 564397661107lysozyme-like protein  TssE
22KUI_0097103912..105807 [+], 1896397661108hypothetical protein  TssF
23KUI_0098105887..106591 [+], 705397661109hypothetical protein 
24KUI_0099106669..109152 [-], 2484397661110TonB-dependent receptor 
25KUI_0100109417..110037 [+], 621397661111hypothetical protein 
26KUI_0101110268..110786 [+], 519397661112hypothetical protein 
27KUI_0102111270..111914 [+], 645397661113hypothetical protein 
28KUI_0103111911..112531 [+], 621397661114hypothetical protein 
29KUI_0104112585..113205 [-], 621397661115hypothetical protein 
30KUI_0105113202..113855 [-], 654397661116hypothetical protein 
31KUI_0106114128..114250 [-], 123397661117hypothetical protein 
32KUI_0107114509..114637 [-], 129397661118hypothetical protein 
33KUI_0109115682..116335 [+], 654397661119hypothetical protein 
34KUI_0111117344..118897 [+], 1554397661120hypothetical protein  TssI
35KUI_0112118912..119805 [+], 894397661121hypothetical protein 
36KUI_0113119815..120711 [+], 897397661122hypothetical protein 
37KUI_0114120723..121613 [+], 891397661123hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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