SecReT6
I. Summary
SecReT6 ID726 insolico
StrainEnterobacter aerogenes EA1509E
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_020181
Location777219..803463
Comment
FunctionN/A
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number001200001
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1ST548_p7531772669..773238 [+], 570444350923Protein tyrosine/serine phosphatase 
2ST548_p7530773242..773487 [-], 246444350924hypothetical protein 
3ST548_p7529773640..774434 [+], 795444350925ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component 
4ST548_p7528774450..775406 [+], 957444350926ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component 
5ST548_p7527775529..776410 [+], 882444350927ABC transporter (iron.B12.siderophore.hemin) , permease component 
6ST548_p7526776889..777167 [+], 279444350928hypothetical protein 
7ST548_p7525777219..778526 [+], 1308444350929Uncharacterized protein ImpJ/VasE  TssK
8ST548_p7524778523..779188 [+], 666444350930hypothetical protein  TssL
9ST548_p7523779185..780867 [+], 1683444350931Outer membrane protein  TagL
10ST548_p7522780864..781109 [-], 246444350932hypothetical protein 
11ST548_p7521781068..783446 [+], 2379444350933VgrG protein  TssI
12ST548_p7520783486..783743 [+], 258444350934hypothetical protein  PAAR
13ST548_p7519783766..783909 [-], 144444350935hypothetical protein 
14ST548_p7518783932..784900 [+], 969444350936hypothetical protein 
15ST548_p7517784903..785661 [+], 759444350937hypothetical protein 
16ST548_p7516785718..786284 [+], 567444350938hypothetical protein 
17ST548_p7515786257..786508 [+], 252444350939hypothetical protein 
18ST548_p7514786712..787284 [+], 573444350940hypothetical protein 
19ST548_p7513787257..787676 [+], 420444350941hypothetical protein 
20ST548_p7512787840..788412 [+], 573444350942hypothetical protein 
21ST548_p7511788385..788804 [+], 420444350943hypothetical protein 
22ST548_p7510788967..789536 [+], 570444350944hypothetical protein 
23ST548_p7509789509..791932 [+], 2424444350945hypothetical protein 
24ST548_p7508792030..795413 [+], 3384444350946probable membrane protein YPO1482  TssM
25ST548_p7507795486..797246 [+], 1761444350947Protein ImpG/VasA  TssF
26ST548_p7506797210..798295 [+], 1086444350948Uncharacterized protein ImpH/VasB  TssG
27ST548_p7505798273..798812 [+], 540444350949Probable lipoprotein  TssJ
28ST548_p7504798905..800170 [-], 1266444350950Error-prone, lesion bypass DNA polymerase V (UmuC) 
29ST548_p7503800173..800412 [-], 240444350951Error-prone repair protein UmuD 
30ST548_p7502800452..800568 [+], 117444350952hypothetical protein 
31ST548_p7501800579..800716 [+], 138444350953hypothetical protein 
32ST548_p7500800858..800983 [+], 126444350954hypothetical protein 
33ST548_p7499801247..803463 [+], 2217444350955VgrG protein  TssI
34ST548_p7498803476..805029 [+], 1554444350956hypothetical protein 
35ST548_p7497805026..805154 [+], 129444350957hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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