SecReT6
I. Summary
SecReT6 ID806 insolico
StrainKlebsiella pneumoniae subsp. rhinoscleromatis strain SB3432
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_021232
Location3245468..3264693
Comment
FunctionN/A
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number001010011
ComponentTssGTssJTssKTssM
Number1111
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III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1KPR_3164 (engD)3240955..3242046 [+], 1092529988754hypothetical protein 
2KPR_31653242128..3242391 [-], 264529988755hypothetical protein 
3KPR_31663242541..3243455 [-], 915529988756hypothetical protein 
4KPR_31673243587..3244999 [-], 1413529988757hypothetical protein  TssA
5KPR_31683245022..3245465 [-], 444529988758hypothetical protein  TssE
6KPR_31693245468..3246082 [-], 615529988759hypothetical protein  TssJ
7KPR_31703245985..3247031 [-], 1047529988760hypothetical protein  TssG
8KPR_31713247031..3248794 [-], 1764529988761hypothetical protein  TssF
9KPR_31723248928..3252314 [-], 3387529988762hypothetical protein  TssM
10KPR_31733252420..3253682 [-], 1263529988763hypothetical protein 
11KPR_31743253685..3253948 [-], 264529988764hypothetical protein  PAAR
12KPR_31753254036..3255013 [-], 978529988765hypothetical protein 
13KPR_3176 (sel1A)3255227..3256282 [-], 1056529988766hypothetical protein 
14KPR_31773256282..3257451 [-], 1170529988767hypothetical protein 
15KPR_31783257480..3258319 [-], 840529988768hypothetical protein 
16KPR_31793258343..3258753 [-], 411529988769hypothetical protein 
17KPR_31803259109..3260317 [-], 1209529988770hypothetical protein 
18KPR_31813260316..3260756 [+], 441529988771hypothetical protein 
19KPR_31823261002..3262699 [-], 1698529988772hypothetical protein  TagL
20KPR_31833262703..3263302 [-], 600529988773hypothetical protein  TssL
21KPR_31843263353..3264693 [-], 1341529988774hypothetical protein  TssK
22KPR_31853265118..3265591 [+], 474529988775hypothetical protein 
23KPR_31863265706..3266245 [+], 540529988776hypothetical protein 
24KPR_31873266271..3266969 [-], 699529988777hypothetical protein 
25KPR_31883267160..3267642 [+], 483529988778hypothetical protein 
26KPR_31893267752..3268651 [+], 900529988779hypothetical protein 
27KPR_31903268626..3269393 [-], 768529988780hypothetical protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 






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