I. Summary

SecReT6 ID	806
Strain	Klebsiella pneumoniae subsp. rhinoscleromatis strain SB3432
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_021232
Location	3245468..3264693
Comment
Function	N/A
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	0	0	1	0	1	0	0	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1

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III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	KPR_3164 (engD)	3240955..3242046 [+], 1092	529988754	hypothetical protein
2	KPR_3165	3242128..3242391 [-], 264	529988755	hypothetical protein
3	KPR_3166	3242541..3243455 [-], 915	529988756	hypothetical protein
4	KPR_3167	3243587..3244999 [-], 1413	529988757	hypothetical protein	TssA
5	KPR_3168	3245022..3245465 [-], 444	529988758	hypothetical protein	TssE
6	KPR_3169	3245468..3246082 [-], 615	529988759	hypothetical protein	TssJ
7	KPR_3170	3245985..3247031 [-], 1047	529988760	hypothetical protein	TssG
8	KPR_3171	3247031..3248794 [-], 1764	529988761	hypothetical protein	TssF
9	KPR_3172	3248928..3252314 [-], 3387	529988762	hypothetical protein	TssM
10	KPR_3173	3252420..3253682 [-], 1263	529988763	hypothetical protein
11	KPR_3174	3253685..3253948 [-], 264	529988764	hypothetical protein	PAAR
12	KPR_3175	3254036..3255013 [-], 978	529988765	hypothetical protein
13	KPR_3176 (sel1A)	3255227..3256282 [-], 1056	529988766	hypothetical protein
14	KPR_3177	3256282..3257451 [-], 1170	529988767	hypothetical protein
15	KPR_3178	3257480..3258319 [-], 840	529988768	hypothetical protein
16	KPR_3179	3258343..3258753 [-], 411	529988769	hypothetical protein
17	KPR_3180	3259109..3260317 [-], 1209	529988770	hypothetical protein
18	KPR_3181	3260316..3260756 [+], 441	529988771	hypothetical protein
19	KPR_3182	3261002..3262699 [-], 1698	529988772	hypothetical protein	TagL
20	KPR_3183	3262703..3263302 [-], 600	529988773	hypothetical protein	TssL
21	KPR_3184	3263353..3264693 [-], 1341	529988774	hypothetical protein	TssK
22	KPR_3185	3265118..3265591 [+], 474	529988775	hypothetical protein
23	KPR_3186	3265706..3266245 [+], 540	529988776	hypothetical protein
24	KPR_3187	3266271..3266969 [-], 699	529988777	hypothetical protein
25	KPR_3188	3267160..3267642 [+], 483	529988778	hypothetical protein
26	KPR_3189	3267752..3268651 [+], 900	529988779	hypothetical protein
27	KPR_3190	3268626..3269393 [-], 768	529988780	hypothetical protein

 Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.

1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

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