SecReT6
Effector Protein ID: 291617999
SecReT6 ID384
T6SS typeA3
Gene symbol-
Locus tagPANA_2446
StrainPantoea ananatis LMG 20103
Repliconchromosome [GenBank: NC_013956] [Browse all T6SS(s) in this replicon]
Location [Strand]2727939..2728421 [-]
Producthypothetical Protein
Effector typeProtein
Homologous effectorSMA3456
DescriptionHcp protein
UniProt IDD4GHU6
KEGG IDpam:PANA_2446
PDB IDNA
Domain hit(s) vs Pfam DUF796 [PF05638], Evalue: 8.80E-39, Aligned region: 6..135
Protein Sequence: 160 a.a.     [Download]
>gi|291617999|ref|YP_003520741.1| hypothetical Protein PANA_2446 [Pantoea ananatis LMG 20103]
MAIDIFLKIDGIEGESQNANHKKWIDVLSFNWGAQQPGNMSVGGGGGAGKVNYRDLSVEALIDKATPALV
KYCASGKHLPKIQLSVCKAGGQEVEYTRITLEDVLVTQTDFTGIGHASTLGMQYSFQASKVALEYWEQAS
QGTKAASVQMGWDIKQNKES
-
Nucleotide Sequence: 483 bp     [Download]
>gi|332139403|ref|NC_013956.2|:c2728421-2727939 Pantoea ananatis LMG 20103 chromosome, complete genome
ATGGCTATTGATATCTTTTTGAAAATAGATGGAATTGAAGGTGAGTCGCAAAATGCAAACCATAAAAAAT
GGATAGATGTTCTGTCATTTAACTGGGGCGCGCAGCAACCAGGTAATATGTCCGTTGGCGGTGGTGGCGG
TGCGGGAAAAGTGAATTATCGCGATTTAAGTGTTGAGGCATTGATCGATAAGGCCACACCGGCGTTAGTG
AAATATTGTGCCAGTGGTAAGCATCTGCCAAAAATTCAGCTGTCTGTTTGCAAGGCAGGCGGGCAGGAAG
TGGAATATACTCGCATCACGCTTGAAGATGTGCTGGTTACGCAGACTGACTTTACCGGCATTGGTCACGC
GTCCACGCTGGGTATGCAGTATTCCTTTCAAGCCAGCAAGGTTGCGCTGGAATACTGGGAACAGGCTTCT
CAGGGAACGAAAGCCGCTTCTGTGCAGATGGGTTGGGATATCAAGCAAAATAAAGAAAGCTAA
 Primer design