SecReT6
Effector Protein ID: 377807577
SecReT6 ID516
T6SS typeA1
Gene symbol-
Locus tagBYI23_C001850
StrainBurkholderia sp. YI23
Repliconchromosome III [GenBank: NC_016590] [Browse all T6SS(s) in this replicon]
Location [Strand]206730..207218 [-]
Producthcp protein
Effector typeProtein
Homologous effectorBTH_II0868
DescriptionHcp protein
UniProt IDG8MJC8
KEGG IDbyi:BYI23_C001850
PDB IDNA
Domain hit(s) vs Pfam DUF796 [PF05638], Evalue: 1.60E-42, Aligned region: 6..147
Protein Sequence: 162 a.a.     [Download]
>gi|377807577|ref|YP_004978769.1| hcp protein [Burkholderia sp. YI23]
MPMPCYLSLEGQNQGKIEGSTKVQGHEGKILVQAVDHTIEIPKSPQTGLPTGKRVHQAMTLTKEIDKSSP
KLFQALTSGEQMKDVTLEFYRISPKGTEEKYYTVKLSNAILTNMQSWTPNCLSPENKQMGHMEDVSFTYE
KITWTYEPDGIEAEDSWLAPKS
-
Nucleotide Sequence: 489 bp     [Download]
>gi|377807392|ref|NC_016590.1|:c207218-206730 Burkholderia sp. YI23 chromosome 3, complete sequence
ATGCCGATGCCGTGCTACCTCTCGCTCGAAGGCCAGAACCAAGGGAAGATCGAAGGCTCGACCAAGGTTC
AGGGTCATGAAGGAAAGATCCTCGTTCAGGCCGTCGATCACACCATCGAAATTCCGAAGAGCCCGCAAAC
GGGCCTGCCCACCGGCAAGCGCGTGCATCAGGCGATGACGCTGACGAAGGAAATCGACAAATCGTCGCCC
AAGCTGTTTCAGGCGCTCACGTCCGGCGAGCAGATGAAGGATGTCACGCTGGAGTTTTATCGCATCTCGC
CGAAGGGTACGGAAGAGAAGTACTACACGGTGAAGCTGTCGAACGCGATTCTGACCAACATGCAGTCGTG
GACGCCGAATTGTCTGTCGCCCGAGAACAAGCAGATGGGGCACATGGAAGATGTGTCGTTCACGTACGAG
AAGATCACATGGACGTATGAGCCGGATGGGATCGAGGCCGAGGATTCGTGGTTGGCGCCGAAGTCTTGA
 Primer design