SecReT6
Effector Protein ID: 472324385
SecReT6 ID744
T6SS typeA4a
Gene symbol-
Locus tagH681_06055
StrainPseudomonas denitrificans ATCC 13867
Repliconchromosome [GenBank: NC_020829] [Browse all T6SS(s) in this replicon]
Location [Strand]1326142..1326660 [-]
Producthypothetical protein
Effector typeProtein
Homologous effectorPSPTO_5435
DescriptionHcp protein
UniProt IDM4WV74
KEGG IDNA
PDB IDNA
Domain hit(s) vs Pfam DUF796 [PF05638], Evalue: 2.10E-39, Aligned region: 6..156
Protein Sequence: 172 a.a.     [Download]
>gi|472324385|ref|YP_007656631.1| hypothetical protein H681_06055 [Pseudomonas denitrificans ATCC 13867]
MPTPAYLSLEGTKQGLITAGTFTEDSVGNIFQEGHEDQVLVQAFNHQVIIPRDPQSGQPTGQRVHKPLMI
TKVFDKSSPLIFNALTSGERLNKCRLEWYRTSSTGTQEHYFTIELEDAVIVDVQSRMPNCQDPNMAHFTH
LEDVYFTYRKIVWTHEVSGTSGSDDWRTPISA
-
Nucleotide Sequence: 519 bp     [Download]
>gi|472323176|ref|NC_020829.1|:c1326660-1326142 Pseudomonas denitrificans ATCC 13867, complete genome
ATGCCAACACCCGCGTATCTGTCCCTCGAAGGCACCAAGCAAGGCCTGATCACCGCCGGCACCTTCACCG
AGGACTCGGTCGGCAACATCTTCCAGGAAGGTCACGAAGACCAGGTTCTGGTTCAGGCCTTCAACCACCA
GGTCATCATCCCGCGTGACCCGCAGTCCGGCCAGCCGACCGGTCAGCGCGTGCACAAGCCGCTGATGATC
ACCAAGGTCTTCGACAAGTCCTCGCCGCTGATCTTCAACGCCCTGACCTCCGGCGAGCGTCTGAACAAGT
GCCGCCTGGAGTGGTACCGCACCTCCTCCACCGGCACCCAGGAGCACTACTTCACCATCGAGCTGGAAGA
CGCGGTGATCGTCGACGTGCAGTCGCGCATGCCGAACTGCCAGGACCCGAACATGGCGCACTTCACTCAC
CTGGAAGACGTCTACTTCACCTACCGCAAGATCGTCTGGACCCACGAAGTCTCCGGCACCTCCGGCTCCG
ACGACTGGCGCACCCCGATCTCTGCCTGA
 Primer design