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Search ThioBase, a database of thiopeptides featured in genetics and chemistry

(I) Search against the structure peptides by HMMER3::phmmer

(II) Search against the precursor peptides by HMMER3::phmmer

(III) Search against the thiopeptide biosynthetic proteins by HMMER3::hmmscan

(IV) Search against the thiopeptide biosynthetic proteins by WU-BLAST2

(V) Browse thiopeptide gene cluster synteny by GBrowse_syn

(VI) Search by keyword

Search field
Thiopeptide
Example: nosiheptide

Structural Peptide
Example: SCTTCECCCSCSS

Gene name
Example: nosG

Activity
Example: Anticancer, Antibacterial, Antimicrobial, Antifungal

Gram Nature
Example: Gram+ ONLY, Gram- ONLY or Gram+/Gram-

Target Organism
Example: Staphylococcus aureus FDA 209P

Producer Organism
Click here for a full list of all bacterial species at ThioBase.
Example: Streptomyces laurentii ATCC 31255



CAMP, Collection of Anti-Microbial Peptides.
BAGEL2, a genome mining tool for bacteriocin.
DAMPD, a manually curated antimicrobial peptide database.