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Organism: Streptococcus pneumoniae ST344 NT 110 58
#IDICE nameICE familyReplicon
1823 in_silico ICESpST344-1--
2824 in_silico ICESpST344-2--
in_silico Putative ICEs predicted by bioinformatic methods
The genome map is not available as this strain has not been completely sequenced.
ElementNo. of sequencesDownloadAlignment
ICEs2Fasta Nucleotide sequence comparison by webACT
(1) Morales M; Martin-Galiano AJ; Domenech M; Garcia E (2015). Insights into the Evolutionary Relationships of LytA Autolysin and Ply Pneumolysin-Like Genes in Streptococcus pneumoniae and Related Streptococci. Genome Biol Evol. 7(9):2747-61. [PudMed:26349755] in_silico
(2) Hilty M; Wuthrich D; Salter SJ; Engel H; Campbell S; Sa-Leao R; de Lencastre H; Hermans P; Sadowy E; Turner P; Chewapreecha C; Diggle M; Pluschke G; McGee L; Koseoglu Eser O; Low DE; Smith-Vaughan H; Endimiani A; Kuffer M; Dupasquier M; Beaudoing E; Weber J; Bruggmann R; Hanage WP; Parkhill J; Hathaway LJ; Muhlemann K; Bentley SD (2014). Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages. Genome Biol Evol. 6(12):3281-94. [PudMed:25480686] in_silico
in_silico in silico analysis literature