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Organism: Acidithiobacillus ferrooxidans ATCC 23270
#IDICE nameICE familyReplicon
1953 in_silico ICEAfe1--
2954 in_silico ICEAfe2--
in_silico Putative ICEs predicted by bioinformatic methods
The genome map is not available as this strain has not been completely sequenced.
ElementNo. of sequencesDownloadAlignment
(1) Castillo A; Tello M; Ringwald K; Acuna LG; Quatrini R; Orellana O (2017). A DNA segment encoding the anticodon stem/loop of tRNA determines the specific recombination of integrative-conjugative elements in Acidithiobacillus species. RNA Biol. :1-8. [PudMed:29168417]
(2) Alamos P; Tello M; Bustamante P; Gutierrez F; Shmaryahu A; Maldonado J; Levican G; Orellana O (2017). Functionality of tRNAs encoded in a mobile genetic element from an acidophilic bacterium. RNA Biol. :1-10. [PudMed:28708455] in_silico
(3) Bustamante P; Tello M; Orellana O (2014). Toxin-antitoxin systems in the mobile genome of Acidithiobacillus ferrooxidans. PLoS One. 9(11):e112226. [PudMed:25384039] experimental in_silico
(4) Bustamante P; Covarrubias PC; Levican G; Katz A; Tapia P; Holmes D; Quatrini R; Orellana O (2012). ICE Afe 1, an actively excising genetic element from the biomining bacterium Acidithiobacillus ferrooxidans. J Mol Microbiol Biotechnol. 22(6):399-407. [PudMed:23486178] experimental
experimental experimental literature
in_silico in silico analysis literature