SecReT6
Protein ID: 115350441
SecReT6 ID148
T6SS typei4b
Gene symbol-
Locus tagBamb_0387
StrainBurkholderia ambifaria AMMD
Repliconchromosome I [GenBank: NC_008390] [Browse all T6SS(s) in this replicon]
Location [Strand]431997..434666 [+]
ProductATPase
NoteTssH
UniProt IDQ0BIS7
KEGG IDbam:Bamb_0387
PDB IDNA
Domain hit(s) vs Pfam AAA_2 [PF07724], Evalue: 2.70E-44, Aligned region: 231..328
AAA_2 [PF07724], Evalue: 2.70E-44, Aligned region: 619..787
AAA [PF00004], Evalue: 3.70E-19, Aligned region: 232..345
AAA [PF00004], Evalue: 3.70E-19, Aligned region: 624..741
AAA_5 [PF07728], Evalue: 1.80E-13, Aligned region: 232..252
AAA_5 [PF07728], Evalue: 1.80E-13, Aligned region: 306..362
AAA_5 [PF07728], Evalue: 1.80E-13, Aligned region: 623..743
ClpB_D2-small [PF10431], Evalue: 1.20E-11, Aligned region: 794..867
AAA_16 [PF13191], Evalue: 2.10E-11, Aligned region: 40..77
AAA_16 [PF13191], Evalue: 2.10E-11, Aligned region: 209..256
AAA_16 [PF13191], Evalue: 2.10E-11, Aligned region: 276..310
AAA_16 [PF13191], Evalue: 2.10E-11, Aligned region: 475..539
AAA_16 [PF13191], Evalue: 2.10E-11, Aligned region: 603..659
AAA_16 [PF13191], Evalue: 2.10E-11, Aligned region: 690..712
AAA_16 [PF13191], Evalue: 2.10E-11, Aligned region: 789..833
Clp_N [PF02861], Evalue: 1.20E-08, Aligned region: 23..74
Clp_N [PF02861], Evalue: 1.20E-08, Aligned region: 113..131
Clp_N [PF02861], Evalue: 1.20E-08, Aligned region: 503..515
AAA_22 [PF13401], Evalue: 1.30E-06, Aligned region: 232..318
AAA_22 [PF13401], Evalue: 1.30E-06, Aligned region: 620..643
AAA_22 [PF13401], Evalue: 1.30E-06, Aligned region: 685..717
Sigma54_activat [PF00158], Evalue: 2.70E-06, Aligned region: 214..248
Sigma54_activat [PF00158], Evalue: 2.70E-06, Aligned region: 621..740
AAA_17 [PF13207], Evalue: 3.60E-05, Aligned region: 233..301
AAA_17 [PF13207], Evalue: 3.60E-05, Aligned region: 623..659
IstB_IS21 [PF01695], Evalue: 0.00016, Aligned region: 216..253
IstB_IS21 [PF01695], Evalue: 0.00016, Aligned region: 623..641
IstB_IS21 [PF01695], Evalue: 0.00016, Aligned region: 798..834
Arch_ATPase [PF01637], Evalue: 0.00028, Aligned region: 211..246
Arch_ATPase [PF01637], Evalue: 0.00028, Aligned region: 284..339
Arch_ATPase [PF01637], Evalue: 0.00028, Aligned region: 621..660
Arch_ATPase [PF01637], Evalue: 0.00028, Aligned region: 694..718
AAA_19 [PF13245], Evalue: 0.00059, Aligned region: 230..258
AAA_19 [PF13245], Evalue: 0.00059, Aligned region: 620..645
AAA_29 [PF13555], Evalue: 0.00062, Aligned region: 224..248
AAA_29 [PF13555], Evalue: 0.00062, Aligned region: 619..648
AAA_14 [PF13173], Evalue: 0.0011, Aligned region: 233..366
AAA_14 [PF13173], Evalue: 0.0011, Aligned region: 485..528
AAA_14 [PF13173], Evalue: 0.0011, Aligned region: 622..704
Zeta_toxin [PF06414], Evalue: 0.0014, Aligned region: 231..252
Zeta_toxin [PF06414], Evalue: 0.0014, Aligned region: 613..663
SRP54 [PF00448], Evalue: 0.0014, Aligned region: 232..253
SRP54 [PF00448], Evalue: 0.0014, Aligned region: 622..655
NACHT [PF05729], Evalue: 0.0021, Aligned region: 232..259
NACHT [PF05729], Evalue: 0.0021, Aligned region: 624..644
AAA_30 [PF13604], Evalue: 0.0022, Aligned region: 217..309
AAA_30 [PF13604], Evalue: 0.0022, Aligned region: 619..647
MobB [PF03205], Evalue: 0.0029, Aligned region: 233..256
MobB [PF03205], Evalue: 0.0029, Aligned region: 622..655
ResIII [PF04851], Evalue: 0.0069, Aligned region: 219..252
ResIII [PF04851], Evalue: 0.0069, Aligned region: 296..314
ResIII [PF04851], Evalue: 0.0069, Aligned region: 488..513
ResIII [PF04851], Evalue: 0.0069, Aligned region: 595..644
RNA_helicase [PF00910], Evalue: 0.008, Aligned region: 233..253
RNA_helicase [PF00910], Evalue: 0.008, Aligned region: 624..645
AAA_18 [PF13238], Evalue: 0.0093, Aligned region: 234..252
AAA_18 [PF13238], Evalue: 0.0093, Aligned region: 625..650
DEAD [PF00270], Evalue: 0.0094, Aligned region: 218..393
DEAD [PF00270], Evalue: 0.0094, Aligned region: 624..649
Protein Sequence: 889 a.a.     [Download]
>gi|115350441|ref|YP_772280.1| ATPase [Burkholderia ambifaria AMMD]
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLDEATGDLPLALRASRVDPHALRADL
ERELTRLKTGNTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSPQFAEM
NVTDLKHKFDEIMGGSSEAEPRQLDTEEGDVAPAANGALPAAGPSKTPALDTYTTNLTQRARDGKIDPVI
GREAEIRQAIDILMRRRQNNPIMTGEAGVGKTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASV
KGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKK
YFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAITEAVRLSHRYISGRQLPDKAI
SVLDTACAKVALAHSATPATIDDTKKRIERIDAEIASLERESAGGASHDERLLELRGARDTALAQLAEDE
ARYEAERVIVAEITELRDALDKARGPSEDGEPVDVSATREKLTERVAALHALQGGEPMVPLQVDGHVVAE
IVAAWTGIPLGRMVKDEIDTVLNLQPLLSARVIGQDHALDAIAQRVRTATANLEDPNKPRGVFMFVGPSG
VGKTETALALADILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDE
VEKAHPDVLEMFFQVFDKGTMDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALR
PQLYKTFKPAFLGRMKVVPYYPISDDVLAEIIELKLERIRRRIDANHKAAFEWDESLVDAVLARCTEVDS
GARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADEAGEFAYTVE
 
Nucleotide Sequence: 2670 bp     [Download]
>gi|115350056|ref|NC_008390.1|:431997-434666 Burkholderia ambifaria AMMD chromosome 1, complete sequence
ATGAGCACGCCTCTGAAGACCCTGATCACGAAACTGAACCCGCTGTGCCGGCACGCGACCGAGCGTGCGG
CGAGCGCGTGCCTGGCGCGCGGCCATTACGAGGTCGATCTGGAGCACCTGTTCCTCGCGCTGCTCGACGA
GGCGACGGGCGACCTGCCGCTCGCACTGCGCGCGAGCCGCGTCGATCCGCATGCGCTGCGTGCCGATCTC
GAGCGCGAACTCACGCGGCTGAAGACGGGCAACACGCGCACGCCGGTTTTCTCCGTGCATCTGATCGCGC
TGTTCGAGCAGGCATGGCTGATCGCGTCGCTCGATTCGCAGCTCGGCCGCATCCGCTCGGGGCACCTGCT
GCTCGCGCTGCTGACCGCGCCCGATCTCGCGCAGTTCGCGCAGCGCATGTCGCCGCAGTTCGCGGAAATG
AACGTGACGGACCTGAAGCACAAGTTCGACGAGATCATGGGCGGCTCGAGCGAGGCCGAGCCGCGCCAGC
TGGATACGGAAGAGGGTGACGTCGCGCCGGCCGCCAACGGCGCCTTGCCCGCGGCCGGCCCGTCGAAGAC
GCCCGCGCTCGACACGTACACGACCAACCTCACGCAGCGTGCGCGCGACGGCAAGATCGATCCGGTGATC
GGTCGCGAAGCCGAGATCCGCCAGGCGATCGACATCCTGATGCGCCGGCGCCAGAACAACCCGATCATGA
CCGGCGAGGCCGGCGTCGGCAAAACGGCGGTCGTCGAGGGCCTCGCGTTGCGGATCGCGGCCGACGACGT
GCCGCCGCCGCTGCGTGGCGTCGCGCTGCACGTGCTCGACATGGGCCTGCTGCAGGCCGGCGCGAGCGTG
AAGGGCGAGTTCGAGAACCGTCTGAAGAGCGTGATCGACGAGGTGAAGAAGAGCGCGCACCCGATCATCC
TGTTCATCGACGAGGCGCACACGATCATCGGCGCGGGCGGCCAGGCCGGCCAGAACGACGCGGCGAACCT
GCTGAAGCCGGCGCTCGCGCGTGGCGAGCTGCGCACGATCGCCGCGACGACGTGGAGCGAATACAAGAAG
TACTTCGAGAAGGATGCGGCGCTTGCGCGGCGTTTCCAGGTCGTGAAGGTCGAGGAGCCGAGCGAGCCGC
TCGCGGCCGCGATGCTGCGCGGGATGTCCGGGCTGATGGAGAAGCACTTCAACGTGCGGATCCTCGACGA
TGCGATCACCGAGGCCGTGCGCCTGTCGCATCGCTACATCAGCGGCCGCCAGCTGCCGGACAAGGCGATC
AGCGTGCTCGACACCGCGTGCGCGAAGGTCGCGCTCGCGCACAGCGCGACGCCGGCGACGATCGACGACA
CGAAGAAGCGCATCGAGCGCATCGACGCGGAAATCGCGTCGCTGGAGCGCGAATCGGCGGGCGGCGCGTC
GCACGACGAGCGGCTGCTCGAACTGCGCGGCGCGCGCGACACTGCGCTCGCGCAATTGGCCGAGGACGAG
GCGCGCTATGAAGCCGAGCGCGTGATCGTCGCCGAGATCACCGAACTGCGTGATGCGCTCGACAAGGCGC
GCGGCCCGTCGGAAGACGGCGAGCCGGTCGACGTGTCGGCCACTCGCGAGAAGCTGACGGAGCGCGTCGC
GGCGCTGCACGCGCTGCAGGGCGGCGAGCCGATGGTGCCGCTGCAGGTCGACGGCCATGTCGTCGCCGAG
ATCGTCGCCGCGTGGACCGGCATTCCGCTCGGCCGTATGGTGAAGGACGAGATCGACACCGTGCTGAATC
TGCAGCCGCTGCTGAGTGCGCGCGTGATCGGCCAGGACCATGCGCTGGACGCGATCGCGCAGCGCGTGCG
CACGGCGACCGCGAACCTCGAGGATCCGAACAAGCCGCGCGGCGTGTTCATGTTCGTCGGGCCGTCGGGC
GTGGGCAAGACCGAGACGGCGCTCGCGCTGGCCGACATCCTGTACGGCGGCGAGCGCAAGATGGTCACGA
TCAACATGAGCGAGTACCAGGAAGCGCACAGCGTGTCGGGCCTGAAGGGTTCGCCGCCGGGCTACGTCGG
CTACGGCGAAGGCGGCGTGCTGACCGAGGCCGTGCGCCGCAACCCGTATTCCGTCGTGCTGCTCGATGAA
GTCGAGAAGGCGCACCCGGACGTGCTCGAGATGTTCTTCCAGGTGTTCGACAAGGGCACGATGGACGACG
CCGAAGGGCGCGAGATCGACTTCCGCAACACGCTGATCATCCTGACGTCGAACGTCGGGTCGGCCGCGGT
GATGCAGGCGTGCCTGAACAAGCCGGCCGAGGAGCTGCCCGATCCGGACGCGCTCGCCGAGGCGCTGCGC
CCGCAGCTGTACAAGACGTTCAAGCCCGCGTTCCTCGGCCGGATGAAGGTCGTGCCGTACTACCCGATTT
CCGACGACGTGCTGGCCGAGATCATCGAGCTGAAGCTCGAACGGATCCGCCGCCGCATCGACGCGAACCA
CAAGGCCGCGTTCGAGTGGGACGAATCGCTCGTCGATGCGGTGCTCGCGCGCTGCACCGAGGTCGACTCG
GGCGCCCGCAACGTCGACCACATCCTGAACGGCACGTTGCTGCCGGAGATCGCGGGCCACGTGCTCGGCC
GGATCGCCGACGGCGCGGCCATCGCGCGCATCGCGGTGCGCGCGGACGAGGCCGGCGAATTCGCTTACAC
CGTCGAATGA