| Protein ID: 172064682 |
 SecReT6 ID | 271 |
| T6SS type | i3 |
| Gene symbol | - |
| Locus tag | BamMC406_6679 |
| Strain | Burkholderia ambifaria MC40-6 |
| Replicon | plasmid pBMC401 [GenBank: NC_010553] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 176307..180215 [+] |
| Product | type VI secretion protein IcmF |
| Note | TssM |
| UniProt ID | B1Z6K6 |
| KEGG ID | bac:BamMC406_6679 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | ImcF-related_N [PF14331], Evalue: 8.20E-92, Aligned region: 262..540 IcmF-related [PF06761], Evalue: 3.30E-90, Aligned region: 440..467 IcmF-related [PF06761], Evalue: 3.30E-90, Aligned region: 590..913 DUF1215 [PF06744], Evalue: 3.00E-30, Aligned region: 439..468 DUF1215 [PF06744], Evalue: 3.00E-30, Aligned region: 1036..1159 SRP54 [PF00448], Evalue: 0.0033, Aligned region: 192..206 SRP54 [PF00448], Evalue: 0.0033, Aligned region: 239..268 |
| Protein Sequence: 1302 a.a. [Download] |
| >gi|172064682|ref|YP_001812332.1| type VI secretion protein IcmF [Burkholderia ambifaria MC40-6] MSYLKRLYYWIFSRRMLACVAVLLACVAVWFLGPLFVFGDLHPFAGDAIRVIAIALLMGWLVLRLLRWPS SPIWVIALCVALWHVGPLFGMGERHPVEPIWVRVLLIATIVFCYAAYGLYMLWQALRTNDALLTRFLQPK TDKPIEAGRDEIHAVAMVVSKAIAQLKRLRGGTLGWRRLLEVDRHLYGLPWYMMVGTAGAGKTTAILGSG LQFPLTEQMSALSAQGIERTVNCEWWFANEAVLIDTAGRYLEQDDPQNEMAKTINAAEWKELLGQLRKHR PRAPLNGAILAVSVADLVSRSEAERTALAANLRARIGELRQQLGVRFPVYVFVTKLDMLAGFTEYFQSLT AEGRTQIWGFTLPCNESGTSSVAELRRHCARELTLLEARVDAGLNNRLLEEYEGDRRKRLYPLAHEFRSL SVQLTDLLELVFLDSRYDDAQLQHMLRGVYFTSAEQTDQVIAADRETVLQRLRRKLARIRGNSDAAAQVR GEGAVSGRRSYFLRNVFQHVIVPEAHLVRADLKWEIRFRLMRWAGHVLTLTLFVWLVFSLTVSYENNHAY LTAISAKASALAARAAAYGKSPKPAAIGGLLDGSRDLPRYRDLDLDAPGGAYRYGLYVVPAIVEASDETY LSLLKQTLLPQIARRAESALSTQLGEQNPDDVYRTLSIYLMLYDDSRYDAKAVKAWVLRDWERSDSAAEM GGRKAMARHLDALFVDGRPVKPTVAPDAALVQRARLFLSQNSAPKRLYERAIGVMEKEAPENFTLSQALG LQGASLFKLVDGSRFEQGVPGLYTYDGYHALFNQRLPEFLARAQEDDDWVMGRAGTRSDWTKSIQGMRVV TAKSSLAEDIRRQYLIDYGNYWQRFLADIRPAMSGENGRDGTLALDLATLRALAAPDSPLVRLARAVVRE TSLSVVDTQEPTSLNDLALTTVGRKSSTVKAAAVEARKIAAQRPEQRLEKELVDNRFAALREVTTGQADT GSGPAMTDKPVAAGGKALQLDAVLTLINEQYTRLVVANNALSANSMPPALDIGTTLQTEAEKLPAPLMLV LGGIATQVADKVGQEVGGLLVMQVDTSVGQGCRRTIDGKYPFTRSSQEVDVEDFNRMFSAGGVFDEFFQK SLASYVDTNSKPWRYKSLSPGMPPIKGPSLEPFERAAAIRELFFRDQGAKRMAWKMNAKVASIDPEITEL LIDIDGQTQRYLHGPVSPFPLSWPGPRGGAIAEVAAKPAIRPDTSTIVATGPWALFRLIERGRLTGTASA SRLTLDFDFDGRHAALELMTGGQLNPLTNDLLTGFHCPGGLA |
| Nucleotide Sequence: 3909 bp [Download] |
| >gi|172064525|ref|NC_010553.1|:176307-180215 Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence ATGTCTTATTTGAAACGTCTTTACTATTGGATCTTTTCTCGGCGGATGTTGGCTTGCGTGGCAGTCCTGC TGGCGTGCGTCGCAGTTTGGTTCCTGGGGCCGTTGTTCGTGTTTGGCGACTTGCATCCATTCGCCGGCGA CGCGATCCGGGTGATCGCGATCGCGCTGCTCATGGGCTGGCTCGTTTTGCGCCTGCTAAGATGGCCGTCA AGCCCGATCTGGGTGATTGCACTTTGCGTCGCGCTCTGGCACGTGGGGCCGCTTTTCGGGATGGGCGAGC GTCATCCTGTCGAGCCGATCTGGGTACGGGTCCTGCTGATTGCGACGATCGTTTTCTGCTACGCAGCCTA CGGCCTGTACATGTTGTGGCAGGCATTGCGGACGAACGACGCGTTGCTGACGCGCTTTCTCCAGCCGAAG ACGGACAAGCCGATCGAAGCCGGGCGCGACGAGATCCACGCGGTCGCCATGGTGGTGTCCAAGGCGATCG CTCAACTGAAGCGTCTGCGTGGCGGCACGCTGGGTTGGCGTCGTTTGCTTGAGGTCGACCGGCACCTGTA CGGGTTGCCGTGGTACATGATGGTCGGCACAGCGGGGGCCGGGAAGACCACGGCGATCCTCGGTTCGGGC CTGCAATTTCCGCTGACCGAGCAGATGAGTGCGCTGTCCGCTCAGGGCATCGAACGCACCGTGAACTGCG AATGGTGGTTCGCGAACGAGGCGGTGCTAATAGATACCGCGGGTCGCTACCTCGAGCAGGACGATCCGCA GAACGAAATGGCCAAGACCATCAACGCGGCGGAATGGAAGGAACTGCTCGGTCAGTTGCGCAAGCATCGG CCCCGGGCGCCGCTCAACGGCGCGATCCTGGCGGTCAGCGTCGCTGACCTGGTAAGCCGGTCGGAAGCCG AACGCACCGCACTCGCCGCGAACTTGCGCGCTCGAATCGGCGAACTTCGGCAGCAGCTCGGGGTTCGTTT CCCGGTATACGTGTTTGTGACGAAGCTGGACATGCTGGCGGGCTTCACGGAGTATTTCCAGTCGCTGACC GCGGAAGGGCGCACCCAGATCTGGGGGTTCACGCTGCCCTGCAACGAGTCGGGCACATCAAGCGTCGCGG AGCTACGGCGTCACTGCGCGCGCGAGCTGACGTTGCTCGAGGCGCGGGTCGATGCTGGCTTGAACAACCG CTTGCTGGAGGAATACGAGGGCGACCGCCGCAAGCGGCTGTACCCGCTGGCGCACGAATTCCGCAGCTTG TCGGTGCAGCTCACGGATCTGCTCGAGCTGGTGTTCCTCGATTCCCGCTACGACGACGCGCAACTCCAGC ACATGCTGCGGGGCGTGTATTTCACGAGCGCGGAGCAGACGGACCAGGTGATCGCCGCGGATCGCGAGAC GGTGTTGCAGCGGCTGAGGCGCAAGCTGGCGCGCATACGCGGGAATAGCGATGCGGCGGCGCAGGTGCGC GGCGAGGGGGCGGTGTCGGGGCGTCGGAGCTACTTCCTGCGCAACGTGTTCCAGCATGTGATCGTGCCGG AAGCGCATCTGGTTCGTGCGGATCTGAAGTGGGAGATTCGCTTTAGATTAATGCGCTGGGCCGGTCATGT GCTGACCTTGACCCTGTTCGTCTGGCTCGTATTCTCGCTCACGGTGAGCTACGAGAACAACCATGCGTAT CTGACCGCGATTTCCGCCAAGGCGTCGGCGCTGGCTGCGCGTGCCGCGGCCTACGGCAAGTCTCCGAAGC CGGCCGCAATCGGCGGTTTGCTGGACGGCTCGAGAGATCTGCCGCGTTATCGCGATCTTGATCTCGACGC GCCGGGCGGCGCGTACCGCTACGGCCTCTATGTCGTTCCGGCGATCGTCGAGGCGTCGGACGAGACCTAT CTGAGTCTGCTGAAACAGACCTTGCTGCCGCAGATCGCGCGGCGCGCCGAAAGCGCGCTGAGCACGCAGC TTGGCGAGCAAAACCCGGACGACGTCTACCGGACGCTGTCCATCTACCTGATGCTGTACGACGACAGCCG TTACGATGCAAAGGCCGTGAAAGCCTGGGTGTTGCGCGACTGGGAGCGTTCGGACAGTGCGGCGGAGATG GGCGGTCGCAAAGCGATGGCGCGGCATCTGGATGCGCTATTCGTCGACGGGCGTCCCGTCAAGCCGACGG TGGCGCCGGACGCGGCGCTCGTGCAGCGGGCGCGGCTCTTCCTGAGCCAGAACTCTGCGCCGAAGCGGCT TTACGAGCGGGCGATCGGCGTGATGGAGAAGGAGGCACCCGAAAACTTCACGCTCTCGCAGGCGCTCGGG TTGCAAGGCGCGTCGCTCTTTAAGCTGGTGGACGGATCGCGCTTCGAGCAGGGCGTTCCGGGACTCTACA CGTACGATGGCTATCACGCGCTGTTCAATCAGCGCCTGCCGGAATTCCTCGCGCGTGCGCAGGAAGACGA CGATTGGGTCATGGGGCGCGCCGGCACGCGTTCCGACTGGACGAAGTCGATACAAGGCATGCGCGTCGTG ACGGCGAAATCATCGCTCGCCGAGGACATTCGCCGCCAGTATCTGATTGATTACGGCAACTATTGGCAGC GGTTTCTCGCAGACATCCGGCCGGCCATGAGCGGCGAGAATGGCCGTGACGGCACGCTGGCTCTCGATCT GGCGACGCTGCGCGCGCTCGCCGCGCCAGACTCGCCGCTGGTGCGGCTGGCGCGGGCGGTTGTCCGGGAA ACGTCGTTGTCGGTCGTCGATACGCAAGAGCCCACGTCGCTGAACGATCTCGCGCTGACGACGGTGGGCC GCAAGTCCTCCACGGTAAAGGCCGCGGCGGTCGAGGCGCGGAAGATCGCCGCGCAGCGGCCGGAACAGCG GCTCGAGAAAGAACTCGTCGACAACCGTTTCGCGGCGCTGCGCGAGGTCACCACCGGTCAGGCGGACACC GGCAGTGGCCCGGCGATGACGGACAAGCCCGTTGCGGCGGGCGGAAAGGCGTTACAACTCGACGCAGTCC TGACGCTGATCAACGAGCAGTACACGCGACTCGTCGTTGCGAACAACGCGTTGTCGGCCAACAGCATGCC GCCCGCCCTCGATATCGGCACGACGTTGCAGACCGAGGCCGAAAAACTTCCGGCGCCGCTGATGCTCGTG CTCGGAGGGATCGCGACGCAGGTGGCGGACAAGGTCGGGCAGGAGGTCGGAGGGCTGCTCGTGATGCAGG TCGATACGAGCGTCGGGCAGGGCTGTCGGCGCACGATCGACGGAAAATATCCGTTCACACGCAGCAGCCA GGAAGTGGACGTCGAGGACTTCAACAGGATGTTCTCAGCCGGCGGTGTATTCGACGAATTCTTCCAGAAA TCGCTCGCGAGCTACGTCGACACAAACTCCAAGCCGTGGCGCTACAAGTCGTTGAGTCCCGGCATGCCGC CGATCAAGGGGCCGAGTCTCGAGCCGTTCGAACGCGCTGCCGCGATCCGTGAACTGTTTTTCCGCGATCA GGGTGCCAAGCGGATGGCTTGGAAGATGAACGCCAAGGTGGCGTCCATCGATCCGGAGATTACCGAATTG CTGATCGACATTGACGGTCAGACGCAACGTTACCTGCATGGGCCTGTCTCGCCGTTCCCGCTTAGCTGGC CGGGACCGCGCGGCGGCGCGATAGCCGAGGTCGCGGCCAAGCCCGCGATCCGGCCGGATACGTCGACGAT CGTCGCGACCGGACCGTGGGCGCTGTTTCGATTGATCGAACGAGGTCGGCTGACTGGCACCGCGTCAGCC AGCCGCTTGACGCTGGATTTCGATTTCGATGGCCGGCATGCGGCGCTGGAGTTGATGACGGGCGGTCAGT TGAATCCGCTGACGAACGATCTGCTGACGGGCTTTCATTGTCCGGGAGGTCTCGCGTGA |