| Protein ID: 227811743 |
 SecReT6 ID | 335 |
| T6SS type | i1 |
| Gene symbol | - |
| Locus tag | VCM66_A0115 |
| Strain | Vibrio cholerae M66-2 |
| Replicon | chromosome II [GenBank: NC_012580] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 128781..130373 [+] |
| Product | sigma-54 dependent transcriptional regulator |
| Note | VasH |
| UniProt ID | C3LUE1 |
| KEGG ID | vcm:VCM66_A0115 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Sigma54_activat [PF00158], Evalue: 3.30E-69, Aligned region: 193..359 Sigma54_activ_2 [PF14532], Evalue: 4.10E-23, Aligned region: 171..171 Sigma54_activ_2 [PF14532], Evalue: 4.10E-23, Aligned region: 194..364 AAA_5 [PF07728], Evalue: 7.50E-07, Aligned region: 217..345 HTH_8 [PF02954], Evalue: 8.00E-07, Aligned region: 347..357 HTH_8 [PF02954], Evalue: 8.00E-07, Aligned region: 486..521 Mg_chelatase [PF01078], Evalue: 0.00026, Aligned region: 204..238 Mg_chelatase [PF01078], Evalue: 0.00026, Aligned region: 272..314 AAA_2 [PF07724], Evalue: 0.0056, Aligned region: 214..315 AAA [PF00004], Evalue: 0.0075, Aligned region: 217..330 |
| Protein Sequence: 530 a.a. [Download] |
| >gi|227811743|ref|YP_002811753.1| sigma-54 dependent transcriptional regulator [Vibrio cholerae M66-2] MSQWLAFATQLVGVRKSHQLALQFVDLLTQGLDLSDSLLLLPSSDGRLLVPHDPQRQFAWSVTDFDVPFA HVLQSSNAMHLTAEELVFWQSNRTFSQLTSRVGMFDSVWIQPLPMDTRQVHSILLLMGESHGIVSAFENA DFLKFIEVFSQQWSLLNDMEREEQRRLELKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSA ANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGL IAQANGGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDL YYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFG CAQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVALAGEPNFAVIHDLKQAVSQFEA LIISERLNRFAGDRAKAAKSLGIPKRTLAYKCLKLEIKTP |
| Nucleotide Sequence: 1593 bp [Download] |
| >gi|227811634|ref|NC_012580.1|:128781-130373 Vibrio cholerae M66-2 chromosome II, complete genome ATGAGTCAATGGCTGGCGTTTGCAACCCAATTGGTGGGAGTAAGGAAGTCCCACCAGCTTGCGCTGCAAT TTGTTGATCTGCTGACTCAAGGCTTAGATCTGAGTGATAGCCTTTTGTTGTTGCCATCGTCGGATGGGCG TTTACTTGTGCCTCATGATCCACAGCGTCAGTTCGCGTGGTCAGTGACGGATTTTGATGTGCCTTTTGCC CATGTTTTGCAGTCATCCAATGCGATGCATTTGACCGCGGAAGAGTTGGTATTTTGGCAATCCAATCGCA CTTTTAGCCAGTTAACCTCTCGCGTGGGGATGTTTGATTCGGTATGGATCCAACCCCTGCCGATGGATAC TCGTCAAGTACACTCGATCTTGCTGTTGATGGGCGAGAGTCACGGTATCGTGAGCGCTTTTGAAAACGCG GACTTTTTGAAGTTTATCGAGGTTTTTTCCCAGCAATGGTCACTGCTCAACGATATGGAACGTGAAGAGC AGCGCCGCTTGGAGCTGAAACAATCGCTGACGGATATTGAACGCGACTCGGCGCAGCGCTCACTGGCCAA TGCGTTATCGCGTACTTTGATTGGTGAAAGCGCTGCGATGCAAAAGCTGCGTGAGCAGATTGTCTCTGCC GCTAACTCTCAGCTCTCGGTCATGGTGCAAGGTGAAACTGGCACGGGGAAAGAGTTAGTCGCCGCGGCCG TGCATGAACTTTCGTCACGTAAGTCTGCGCCGTTTGTTGCGATCAACTGTGCGGCGATCCCTGAGCATCT ACTGGAAAGTGAACTGTTTGGTTACTGCAAAGGGGCATTTTCTGGAGCGGACAGCGATAAACAGGGACTT ATCGCACAAGCGAATGGTGGCACGCTATTTCTGGATGAGATCGGCGATATGCCGCTCACCTTACAAGCCA AATTATTGCGTGTGCTTGAATCGCGTACTTTTCGACCGCTCGGTGGTAAGCAGGAGCTCAGTTCCGATTT CCGTCTGGTATCTGCCACACACGTCAATCTGCTGGATCAAGTACGCAAAAAAGAATTTCGCCAAGATCTC TATTACCGTCTATTCCAGTATCCGATCACCTTGCCGCGTTTGGCGGCACGCTTGGAAGATATTGAGCTGC TCAGTGAGCACTTTGTGCGCGTGTTCAACTTGCAACATAACACGCGCATTCGTGGTTTGAACTATCGAGC CATCGACTGCCTTAAGCAGTACGACTTCCCGGGAAATGTGCGTGAGCTGAAACATTTGATTGAGTTTGGC TGCGCGCAAACAGCGGATGGTACGCAGGTGGAAGCTAGTTGCTTTGCCCATCGTTTACAAACCCTACCCT GTCTTGCGCCTGAAGCGACGCCGGTAGCCGTTTCTGTCGAAACTGAGAACGTGGATCTTGAACCCTCGGT TGCGCTGGCTGGAGAACCGAATTTTGCGGTTATCCATGATTTGAAACAGGCGGTCAGTCAGTTTGAAGCG TTGATCATCAGTGAGCGTTTGAACCGCTTTGCTGGCGATCGCGCGAAAGCGGCGAAAAGTCTCGGTATCC CTAAGCGTACCTTGGCCTACAAGTGCCTGAAATTGGAGATCAAAACCCCATGA |