| Protein ID: 319791256 |
 SecReT6 ID | 417 |
| T6SS type | i3 |
| Gene symbol | - |
| Locus tag | Varpa_0564 |
| Strain | Variovorax paradoxus EPS |
| Replicon | chromosome [GenBank: NC_014931] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 625402..627294 [+] |
| Product | type VI secretion protein |
| Note | TssF |
| UniProt ID | E6V5H9 |
| KEGG ID | vpe:Varpa_0564 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | DUF879 [PF05947], Evalue: 6.00E-198, Aligned region: 5..630 |
| Protein Sequence: 630 a.a. [Download] |
| >gi|319791256|ref|YP_004152896.1| type VI secretion protein [Variovorax paradoxus EPS] MDPRLLNLYEQELRYFRESSSEFARAFPKIAHRLGIEGQEVADPYVERLIEATAFLSARVNLKLDAEYPR FTGHLLDIVYPNFLAPTPAMAVVSFSPDLDDANLATGPKLPRGAGLRARQAVGQNTHCEFRTSSALRIWP MEVQRAQYFTYAPDLPLATHPQSRAIRGGLRIALRATAGLKFNQIALDDLVLHLGGAEDVAWQLQECALG QPIGVMVRPLSPTGALQGAAQSLPASAIQPVGFEDDEALLPVTATGFSGFRLLQEYFAFPQRFQFLRIAG LQALLATMPVTEIELVLLFSRGDAALEKLVTAENVQLHCVPVVNLFNKRLDRVPLTEGVSQFHLVPDRTR PQDFEVHTVTEVIGHGAPGADATAAEQPFRPFYSAFHGTRHNHPAYFTTTREPRMLSVRQRTEGHRSSHI GSEVYMQIVDPQQAPYAATLRQLAVSAMCTNRDLPLLMPLGRDNDFDCVDSFPVQRVRMVRGPSRPVSPV VSQGLGWRVVDHLALNYLSISDSTPEQGAAALRETLMLYATHADEMRQGQVRGLLSVKSKPVARRLPLKG PIAFGRGLEVTLEVDKDAFHGHSVFLFGAVMSRFLARHVEVNHFVETVLRVAGKGETMRWRPLCGTRQIL |
| Nucleotide Sequence: 1893 bp [Download] |
| >gi|319790694|ref|NC_014931.1|:625402-627294 Variovorax paradoxus EPS chromosome, complete genome ATGGACCCTCGGCTGCTGAACCTGTATGAACAGGAACTGCGCTACTTCCGCGAAAGCTCTTCGGAGTTTG CGCGCGCGTTTCCGAAGATCGCGCACCGGCTGGGCATCGAGGGCCAGGAGGTCGCCGACCCGTATGTCGA GCGGCTGATCGAGGCCACGGCCTTCCTGTCGGCGCGCGTCAACCTCAAGCTCGATGCCGAGTACCCGCGC TTCACGGGGCACCTGCTCGACATCGTCTATCCGAACTTTCTTGCACCCACGCCCGCGATGGCGGTGGTGT CCTTCTCGCCCGACCTCGACGACGCCAACCTCGCGACCGGCCCCAAGCTGCCACGCGGCGCCGGCCTGCG TGCGCGCCAGGCCGTGGGGCAGAACACGCACTGCGAATTCCGCACATCGAGCGCGTTGCGCATCTGGCCG ATGGAGGTGCAGCGCGCGCAGTACTTCACCTACGCGCCCGACCTGCCGCTGGCCACGCACCCGCAATCGC GCGCCATCCGCGGGGGCCTGCGCATTGCACTGCGCGCGACGGCGGGGCTCAAGTTCAACCAGATCGCGCT CGACGACCTCGTGCTGCATCTGGGCGGTGCGGAAGACGTGGCGTGGCAACTGCAGGAGTGCGCGCTGGGC CAACCCATCGGTGTGATGGTGCGGCCCCTGTCGCCCACCGGCGCATTGCAGGGCGCGGCGCAGAGCTTGC CGGCCAGCGCGATTCAGCCGGTCGGCTTCGAGGACGACGAGGCGCTGCTGCCGGTCACGGCCACGGGCTT CTCGGGCTTTCGTTTGCTGCAGGAGTACTTCGCATTTCCGCAGCGCTTCCAGTTCCTGCGCATCGCGGGG CTGCAGGCGCTGCTCGCCACGATGCCGGTCACCGAGATCGAGCTCGTGCTGCTGTTCTCGCGCGGCGATG CGGCACTCGAAAAGCTGGTGACCGCCGAGAACGTGCAGCTGCACTGCGTGCCGGTGGTCAACCTCTTCAA CAAGCGGCTCGATCGCGTGCCGCTCACCGAAGGCGTGAGCCAGTTCCACCTGGTGCCCGACCGCACACGG CCGCAGGACTTCGAGGTGCATACCGTCACCGAGGTCATCGGCCACGGCGCGCCGGGTGCCGATGCGACGG CTGCCGAGCAGCCGTTCCGGCCGTTCTACTCGGCCTTCCATGGCACGCGGCACAACCACCCCGCGTACTT CACGACCACGCGCGAGCCGCGCATGCTGTCGGTGCGCCAGCGCACCGAGGGGCACCGCAGCAGCCACATC GGCTCCGAGGTCTACATGCAGATCGTCGATCCGCAGCAGGCGCCGTACGCGGCCACGCTGCGGCAGCTGG CGGTGAGCGCGATGTGCACCAACCGCGACCTGCCGCTCCTGATGCCGCTCGGCCGCGACAACGACTTCGA TTGCGTCGACTCTTTCCCGGTGCAGCGCGTGCGCATGGTGCGCGGGCCTTCGCGGCCGGTGTCGCCGGTG GTGAGCCAGGGGCTGGGCTGGCGGGTGGTCGATCACCTCGCGCTCAACTACCTTTCGATTTCCGACAGCA CGCCGGAGCAGGGTGCCGCCGCGCTGCGCGAAACGCTGATGCTCTATGCCACGCATGCCGACGAGATGCG CCAGGGCCAGGTGCGCGGCCTTCTCTCGGTGAAGAGCAAGCCGGTGGCGCGCCGCCTGCCGCTCAAGGGG CCGATCGCATTCGGGCGCGGGCTCGAAGTGACGCTGGAGGTCGACAAGGACGCGTTCCACGGCCACAGCG TGTTTCTCTTCGGCGCCGTGATGTCGCGCTTTCTCGCGCGCCATGTGGAGGTCAATCACTTCGTCGAGAC CGTGCTGCGCGTGGCGGGCAAGGGCGAGACCATGCGATGGAGGCCGCTGTGCGGGACCCGGCAGATTCTG TAG |