| Protein ID: 319791259 |
 SecReT6 ID | 417 |
| T6SS type | i3 |
| Gene symbol | - |
| Locus tag | Varpa_0567 |
| Strain | Variovorax paradoxus EPS |
| Replicon | chromosome [GenBank: NC_014931] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 629741..632521 [+] |
| Product | type VI secretion ATPase, clpv1 family |
| Note | TssH |
| UniProt ID | E6V5I2 |
| KEGG ID | vpe:Varpa_0567 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | AAA_2 [PF07724], Evalue: 3.60E-39, Aligned region: 233..312 AAA_2 [PF07724], Evalue: 3.60E-39, Aligned region: 658..824 AAA [PF00004], Evalue: 1.70E-20, Aligned region: 235..368 AAA [PF00004], Evalue: 1.70E-20, Aligned region: 664..748 ClpB_D2-small [PF10431], Evalue: 1.30E-14, Aligned region: 216..229 ClpB_D2-small [PF10431], Evalue: 1.30E-14, Aligned region: 831..909 AAA_5 [PF07728], Evalue: 2.10E-12, Aligned region: 235..259 AAA_5 [PF07728], Evalue: 2.10E-12, Aligned region: 663..780 AAA_16 [PF13191], Evalue: 3.00E-11, Aligned region: 35..71 AAA_16 [PF13191], Evalue: 3.00E-11, Aligned region: 212..257 AAA_16 [PF13191], Evalue: 3.00E-11, Aligned region: 279..314 AAA_16 [PF13191], Evalue: 3.00E-11, Aligned region: 655..708 AAA_22 [PF13401], Evalue: 5.70E-08, Aligned region: 235..316 AAA_22 [PF13401], Evalue: 5.70E-08, Aligned region: 368..401 AAA_22 [PF13401], Evalue: 5.70E-08, Aligned region: 661..690 Sigma54_activat [PF00158], Evalue: 1.70E-07, Aligned region: 229..260 Sigma54_activat [PF00158], Evalue: 1.70E-07, Aligned region: 663..782 AAA_14 [PF13173], Evalue: 1.40E-06, Aligned region: 235..320 AAA_14 [PF13173], Evalue: 1.40E-06, Aligned region: 662..760 NACHT [PF05729], Evalue: 1.50E-05, Aligned region: 235..321 NACHT [PF05729], Evalue: 1.50E-05, Aligned region: 664..690 Zeta_toxin [PF06414], Evalue: 2.40E-05, Aligned region: 234..258 Zeta_toxin [PF06414], Evalue: 2.40E-05, Aligned region: 655..713 AAA_17 [PF13207], Evalue: 2.50E-05, Aligned region: 235..274 AAA_17 [PF13207], Evalue: 2.50E-05, Aligned region: 663..699 AAA_19 [PF13245], Evalue: 2.60E-05, Aligned region: 234..258 AAA_19 [PF13245], Evalue: 2.60E-05, Aligned region: 661..685 AAA_18 [PF13238], Evalue: 0.0001, Aligned region: 235..259 AAA_18 [PF13238], Evalue: 0.0001, Aligned region: 665..692 Arch_ATPase [PF01637], Evalue: 0.00016, Aligned region: 214..256 Arch_ATPase [PF01637], Evalue: 0.00016, Aligned region: 662..684 IstB_IS21 [PF01695], Evalue: 0.00019, Aligned region: 219..257 IstB_IS21 [PF01695], Evalue: 0.00019, Aligned region: 663..684 AAA_29 [PF13555], Evalue: 0.00059, Aligned region: 227..251 AAA_29 [PF13555], Evalue: 0.00059, Aligned region: 660..688 AAA_25 [PF13481], Evalue: 0.00078, Aligned region: 220..259 AAA_25 [PF13481], Evalue: 0.00078, Aligned region: 287..327 AAA_25 [PF13481], Evalue: 0.00078, Aligned region: 661..688 DUF815 [PF05673], Evalue: 0.0023, Aligned region: 225..311 DUF815 [PF05673], Evalue: 0.0023, Aligned region: 663..704 NTPase_1 [PF03266], Evalue: 0.0034, Aligned region: 235..258 NTPase_1 [PF03266], Evalue: 0.0034, Aligned region: 286..312 NTPase_1 [PF03266], Evalue: 0.0034, Aligned region: 663..685 Clp_N [PF02861], Evalue: 0.0049, Aligned region: 28..70 Hpr_kinase_C [PF07475], Evalue: 0.005, Aligned region: 235..247 Hpr_kinase_C [PF07475], Evalue: 0.005, Aligned region: 661..681 UPF0079 [PF02367], Evalue: 0.0064, Aligned region: 235..256 UPF0079 [PF02367], Evalue: 0.0064, Aligned region: 660..691 SRP54 [PF00448], Evalue: 0.0077, Aligned region: 234..258 SRP54 [PF00448], Evalue: 0.0077, Aligned region: 662..696 RNA_helicase [PF00910], Evalue: 0.008, Aligned region: 236..256 RNA_helicase [PF00910], Evalue: 0.008, Aligned region: 664..685 |
| Protein Sequence: 926 a.a. [Download] |
| >gi|319791259|ref|YP_004152899.1| type VI secretion ATPase, clpv1 family [Variovorax paradoxus EPS] MSEISRTALFGKLNSLAYKAIEGATVFCKMRGNPYVELEHWFAQLLQAQDSDLHRVIQHYGLDVSVIAKD MTAALDRLPRGATAISDFSPHIENAIERAWTYATLQFGEAQVRTGYILVGMLKTQSLRNPLFNLSKQFEK IKVEDLADNFPKVCDASPESQMRAQDGTGMGSGAPGEDSGAMAPAAMGKGDALKKFAVDLTEKAKKGEMD PVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGFAQRLARGDVPPQLKDVKLLTLDIGLLQAG ASMKGEFEQRLRQVIDEVQSSPTPIILFIDEIHTLVGAGGAAGTGDAANLLKPALARGNLRTIGATTWAE YKKYIEKDPALTRRFQVVQVPEPDEVKAILMLRGVASVLEKHHRVQLLDEAIEAAVKLSHRYIPARQLPD KAVSLLDTACARVAVSQHATPPEVEDCMRRIEGLTVEQEIIGREATIGIDVTKRSAQVEALLVESKLQLE ALNARWQEEKGLVDRLLELRSKLRAGNKPVDKDAGAATTPVRTEPVEVPGAASTSSARTDGDASSGSDAA PAHDRAALLAELHELQAKIHAVQGESPLILPSVDEQAVASVVADWTGIPVGRMVKNEVEAVLKLADTLNQ RVIGQKHGLEMIARRIQTSRARLDNPQKPIGVFMLCGTSGVGKTETALALAEALYGGEQNIITINMSEFQ EAHTVSTLKGAPPGYVGYGEGGILTEAVRRRPYSVVLLDEVEKAHPDVHEIFFQVFDKGWMEDGEGRMID FKNTIILLTTNAGSELVMSMCRDPELLPDSNALADALKAPLMKVFPPALLGRIVTIPYYPLSPDMMKKIV RLQLGRIKKRVETNHGVPFEYTEAVIEQVVARCQDPESGGRVIDAILTNTVLPTISVEYLQRLASGGEIR RVALDVKDADFTYAFD |
| Nucleotide Sequence: 2781 bp [Download] |
| >gi|319790694|ref|NC_014931.1|:629741-632521 Variovorax paradoxus EPS chromosome, complete genome ATGAGTGAAATCAGTCGCACCGCCCTCTTCGGCAAGCTCAACTCGCTGGCCTACAAGGCCATCGAAGGCG CCACGGTGTTCTGCAAGATGCGGGGCAATCCGTATGTGGAACTGGAGCACTGGTTCGCCCAGCTGCTGCA GGCGCAGGACTCCGACCTGCACCGCGTGATCCAGCACTACGGCCTCGATGTGTCGGTGATCGCCAAGGAC ATGACGGCCGCGCTCGACCGCCTGCCCCGCGGCGCCACCGCGATCAGCGACTTTTCGCCGCACATCGAGA ACGCCATCGAACGGGCATGGACCTACGCCACGCTGCAGTTCGGCGAGGCGCAGGTGCGCACCGGCTACAT CCTGGTGGGCATGTTGAAGACGCAGAGCCTGCGCAACCCGCTCTTCAACCTGTCCAAGCAGTTCGAGAAG ATCAAGGTCGAAGACCTCGCCGACAACTTCCCGAAGGTGTGCGATGCCTCGCCCGAATCTCAGATGCGTG CGCAGGACGGCACCGGCATGGGCAGCGGCGCCCCCGGCGAAGACTCGGGCGCGATGGCGCCGGCCGCCAT GGGCAAGGGCGATGCGCTGAAAAAATTTGCTGTCGACCTCACGGAGAAAGCCAAGAAGGGAGAGATGGAT CCGGTGACCGGGCGGGACGAGGAAATCCGCCAGATCGTCGACATCCTCATGCGCCGCCGCCAGAACAATC CGCTCCTGACCGGCGAGGCCGGCGTCGGCAAGACGGCGGTGGTGGAAGGCTTTGCGCAGCGCCTCGCGCG CGGCGACGTGCCGCCGCAACTGAAGGACGTGAAGCTGCTCACGCTCGACATTGGCCTCTTGCAAGCGGGC GCGAGCATGAAAGGCGAGTTCGAGCAGCGCCTGCGCCAGGTGATCGACGAGGTGCAGAGCTCGCCGACGC CGATCATCCTGTTCATCGACGAGATCCACACGCTCGTGGGCGCGGGCGGCGCGGCCGGCACCGGCGATGC AGCCAACCTGCTCAAGCCGGCGCTCGCGCGCGGCAACCTGCGCACCATCGGCGCGACCACCTGGGCCGAG TACAAGAAGTACATCGAAAAAGACCCGGCGCTCACCCGCCGCTTCCAGGTCGTGCAGGTGCCCGAGCCCG ACGAGGTGAAGGCGATCCTGATGCTGCGCGGCGTGGCCAGCGTGCTGGAGAAGCACCACCGCGTGCAGCT GCTCGACGAGGCCATCGAGGCTGCAGTCAAGCTCTCGCACCGCTACATTCCCGCGCGCCAGTTGCCCGAC AAGGCGGTGAGCTTGCTGGACACCGCATGTGCCCGCGTCGCCGTGTCGCAGCATGCGACGCCGCCCGAAG TGGAAGACTGCATGCGCCGCATCGAAGGGCTCACGGTCGAGCAGGAAATCATCGGCCGCGAAGCCACCAT CGGCATCGATGTGACGAAGCGCTCGGCGCAGGTGGAAGCGCTGCTGGTCGAGTCGAAACTGCAGCTCGAA GCGCTGAATGCGCGCTGGCAGGAAGAGAAGGGACTGGTCGACCGGTTGCTGGAGCTGCGCAGCAAATTGC GTGCGGGCAACAAGCCGGTGGACAAAGATGCTGGTGCGGCAACCACCCCCGTTCGCACTGAGCCTGTCGA AGTGCCAGGCGCGGCTTCGACAAGCTCAGCCCGAACGGATGGAGATGCATCGAGCGGATCGGACGCTGCC CCCGCGCACGACCGCGCCGCGCTGCTTGCCGAACTGCACGAGCTGCAGGCCAAGATTCACGCGGTGCAGG GCGAATCGCCGCTCATCCTTCCTTCGGTCGACGAACAGGCCGTGGCCTCGGTCGTCGCGGACTGGACCGG CATCCCGGTCGGCCGCATGGTCAAGAACGAAGTGGAAGCGGTGCTCAAGCTCGCCGACACGCTGAACCAG CGCGTCATCGGCCAGAAGCACGGCCTGGAGATGATCGCGCGCCGCATCCAGACCTCGCGTGCGCGGCTGG ACAACCCGCAGAAACCCATCGGCGTCTTCATGCTGTGCGGCACCTCGGGCGTGGGCAAGACCGAGACCGC GCTTGCGCTGGCCGAGGCGCTCTATGGCGGCGAGCAGAACATCATCACCATCAACATGAGCGAGTTCCAG GAGGCGCACACCGTCTCCACGCTCAAGGGCGCGCCGCCCGGCTACGTCGGTTATGGCGAGGGCGGCATCC TGACCGAGGCGGTGCGCCGCCGTCCCTACAGCGTGGTGCTGCTCGACGAAGTGGAGAAGGCCCATCCCGA CGTGCACGAGATCTTCTTCCAGGTCTTCGACAAGGGCTGGATGGAAGACGGCGAGGGCCGGATGATCGAT TTCAAGAACACGATCATCCTGCTCACCACCAACGCCGGCAGCGAGCTCGTCATGAGCATGTGCCGCGACC CCGAGCTGCTGCCCGATTCGAACGCACTGGCCGATGCGCTGAAGGCGCCGCTCATGAAGGTGTTCCCGCC CGCGCTGCTGGGCCGCATCGTCACCATTCCCTATTACCCGCTGTCGCCGGACATGATGAAGAAGATCGTG CGGCTGCAGCTGGGCCGCATCAAGAAGCGCGTGGAGACCAACCACGGCGTGCCCTTCGAATACACCGAGG CGGTGATCGAGCAGGTGGTCGCGCGCTGCCAGGACCCGGAGTCGGGCGGCCGCGTGATCGACGCGATCCT GACCAACACGGTGCTGCCCACCATTTCGGTCGAGTACCTGCAACGCCTGGCCTCCGGTGGAGAGATCCGC CGCGTCGCGCTGGACGTGAAGGACGCCGACTTCACCTACGCGTTCGACTGA |