| Protein ID: 319791265 |
 SecReT6 ID | 417 |
| T6SS type | i3 |
| Gene symbol | - |
| Locus tag | Varpa_0573 |
| Strain | Variovorax paradoxus EPS |
| Replicon | chromosome [GenBank: NC_014931] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 640520..642898 [+] |
| Product | type VI secretion system vgr family protein |
| Note | TssI |
| UniProt ID | E6V5I8 |
| KEGG ID | vpe:Varpa_0573 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 1.20E-56, Aligned region: 27..335 Phage_base_V [PF04717], Evalue: 3.10E-26, Aligned region: 415..506 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 557..571 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 557..576 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 572..594 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 596..619 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 621..642 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 646..667 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 672..691 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 692..715 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 709..730 Gp5_C [PF06715], Evalue: 5.60E-22, Aligned region: 719..734 DUF2345 [PF10106], Evalue: 0.0018, Aligned region: 656..780 |
| Protein Sequence: 792 a.a. [Download] |
| >gi|319791265|ref|YP_004152905.1| type VI secretion system vgr family protein [Variovorax paradoxus EPS] MADHEFRIESDSPANGELMFWRIVGHEALARPSTYELTVLSKNRALDAKDILGRAFDVVIEFQDKDGGVH ERHCQGHAVRFERTGHVGRHFEYRIGLRSWFWLLCKRINSRILQDKKVLEVLDAVFEDSPIKRFKKTQTS NVIGSHNPRRYCVQHQESDYQFLSRLLEDEGIYYWFDAHDAPGTMHLSDASDIAHDKLPVEGTLRHVASD TTEARHNEISRWVSARQFDTGTYASRDSNFKSIKKKLEAAGGAPDKHELAEFEAFEFAGGYFSGGDADDK GKLRGEEIVARRQRHWALTTWPDVTAGRSFTFEGDPDGARDGDYVIAACTFAASHPGYESIPHSTPRMPI EQALREALDDDAVNAEARPALEALIASAPALRTDAQGTSAFLITALPIDVPFRPPRLTPRVVMPGPQSAI VVGPAGEEIHADDFGRVKVHFHWDRYDKSDEKSTCWVRVSQPWAGKGWGGYFIPRIGQEVIVDFLNGDPD RPIIVGRVYNDDQPIPFGSHTQSGFRTRSTPKGSASNCNEFRFEDKKGSEQVYLHAEKNQDIEVENDETH WVGHDRTKTIDHDETTHVKHDRTETVDNNETITVHGQRTETVDKNETITVHMNRTETVDLNETISIGQNR SITVGASETATVALQRTHTVGINETITVGAAQEITVGAMQAVTVGASQTINVGANQSSSIGANRSVNVGA NLSTTVGKNESRSVGEGRTTSVGKDDSLTVGKNLVISAGDSISITTGSASITMKKDGTIVIKGKDITIDA SGKINAKASSDIVMKGSKILQN |
| Nucleotide Sequence: 2379 bp [Download] |
| >gi|319790694|ref|NC_014931.1|:640520-642898 Variovorax paradoxus EPS chromosome, complete genome ATGGCTGATCACGAGTTCCGTATCGAAAGCGATTCGCCCGCCAACGGCGAACTGATGTTCTGGCGCATCG TCGGCCACGAGGCGCTCGCGCGCCCGTCGACCTACGAACTCACCGTGCTCTCGAAGAACCGCGCGCTCGA CGCCAAGGACATCCTGGGCCGGGCGTTCGACGTGGTCATCGAGTTCCAGGACAAGGACGGCGGCGTGCAC GAGCGCCACTGCCAGGGCCATGCGGTGCGCTTCGAGCGCACGGGCCACGTGGGGCGGCATTTCGAATACC GCATCGGGCTGCGCTCGTGGTTCTGGCTGCTCTGCAAGCGCATCAACTCGCGCATCCTGCAGGACAAGAA GGTGCTCGAAGTGCTCGACGCGGTGTTCGAAGACAGCCCGATCAAGCGCTTCAAGAAGACGCAGACCAGC AACGTGATCGGCTCCCACAATCCGCGGCGCTATTGCGTGCAGCACCAGGAGAGCGACTACCAGTTTCTAT CGCGCCTGTTGGAAGACGAAGGTATCTATTACTGGTTCGACGCGCACGACGCGCCGGGCACCATGCACCT GTCGGACGCAAGCGACATCGCGCACGACAAGCTGCCCGTCGAGGGCACGCTGCGCCACGTGGCGAGCGAC ACCACCGAGGCGAGGCACAACGAGATCTCGCGCTGGGTGAGCGCGCGCCAGTTCGACACCGGCACCTACG CATCGCGGGACAGCAACTTCAAGTCGATCAAGAAGAAGCTGGAGGCCGCGGGCGGCGCGCCCGACAAGCA CGAGTTGGCCGAGTTCGAGGCCTTCGAGTTCGCGGGCGGGTACTTCTCGGGCGGCGACGCGGACGACAAG GGCAAGCTGCGCGGCGAAGAGATCGTCGCGCGCCGCCAGCGCCACTGGGCGCTCACCACCTGGCCCGACG TGACCGCGGGGCGCAGCTTCACCTTCGAAGGCGACCCCGACGGCGCGCGCGACGGCGATTACGTCATCGC GGCCTGCACCTTCGCGGCGAGCCATCCGGGCTACGAGAGCATTCCCCACAGCACGCCGCGCATGCCCATC GAGCAGGCGCTGCGCGAAGCGCTCGACGACGATGCGGTGAATGCCGAGGCGCGGCCCGCGCTCGAAGCGC TGATCGCCAGTGCCCCCGCGCTGCGCACCGATGCGCAGGGCACGAGCGCTTTTCTCATCACCGCGTTGCC GATCGACGTGCCGTTCCGTCCGCCGCGCCTCACGCCCCGCGTGGTAATGCCGGGGCCGCAATCGGCCATC GTGGTGGGGCCGGCCGGCGAGGAGATCCATGCCGACGACTTCGGCCGCGTGAAGGTGCACTTTCACTGGG ACCGCTACGACAAGAGCGACGAAAAATCCACCTGCTGGGTCCGCGTGTCGCAGCCGTGGGCGGGCAAGGG CTGGGGCGGATATTTCATTCCGCGCATCGGGCAGGAGGTGATCGTCGACTTCCTGAACGGCGACCCCGAC CGGCCGATCATCGTGGGCCGCGTCTACAACGACGACCAGCCGATTCCCTTCGGCTCGCACACGCAGAGCG GCTTTCGCACGCGCTCCACGCCCAAGGGCAGCGCCTCGAACTGCAACGAGTTCCGCTTCGAGGACAAGAA GGGCTCGGAGCAGGTGTACCTGCACGCCGAGAAGAACCAGGACATCGAGGTCGAGAACGACGAGACGCAC TGGGTGGGTCACGACCGCACCAAGACCATCGACCACGACGAGACCACGCACGTCAAGCACGACCGCACCG AGACGGTCGACAACAACGAGACCATCACCGTGCATGGCCAGCGCACGGAAACCGTGGACAAGAACGAGAC CATCACCGTCCACATGAACCGCACGGAGACGGTGGACCTGAACGAGACGATCTCCATCGGGCAGAACCGC TCGATCACCGTGGGGGCGAGCGAGACGGCGACGGTGGCGCTGCAGCGCACGCACACGGTGGGGATCAACG AGACCATCACCGTGGGCGCGGCGCAGGAGATCACCGTCGGCGCGATGCAGGCGGTGACGGTGGGGGCGAG CCAGACGATCAACGTCGGCGCGAACCAGTCGAGCAGCATCGGGGCGAACCGGTCGGTGAATGTGGGGGCG AACCTCTCCACCACCGTGGGAAAGAACGAATCGCGCAGCGTGGGCGAGGGGCGCACCACCAGCGTGGGGA AGGACGATTCGCTCACGGTCGGCAAGAACCTCGTCATCAGCGCGGGCGACTCGATCTCGATCACGACCGG CAGCGCGAGCATCACGATGAAGAAGGACGGGACCATCGTCATCAAGGGCAAGGACATCACGATCGACGCC TCGGGAAAGATCAATGCGAAGGCGAGCAGCGACATCGTGATGAAGGGCTCGAAGATTTTGCAGAACTGA |