| Protein ID: 319796149 |
 SecReT6 ID | 420 |
| T6SS type | i4b |
| Gene symbol | - |
| Locus tag | Varpa_5523 |
| Strain | Variovorax paradoxus EPS |
| Replicon | chromosome [GenBank: NC_014931] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 6004714..6007635 [-] |
| Product | rhs element vgr protein |
| Note | TssI |
| UniProt ID | E6VAD4 |
| KEGG ID | vpe:Varpa_5523 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 3.30E-64, Aligned region: 56..375 Phage_GPD [PF05954], Evalue: 3.30E-64, Aligned region: 433..475 DUF2345 [PF10106], Evalue: 2.10E-45, Aligned region: 253..288 DUF2345 [PF10106], Evalue: 2.10E-45, Aligned region: 712..865 T6SS_Vgr [PF13296], Evalue: 7.00E-32, Aligned region: 554..664 T6SS_Vgr [PF13296], Evalue: 7.00E-32, Aligned region: 738..763 Phage_base_V [PF04717], Evalue: 3.00E-19, Aligned region: 435..536 |
| Protein Sequence: 973 a.a. [Download] |
| >gi|319796149|ref|YP_004157789.1| rhs element vgr protein [Variovorax paradoxus EPS] MSSDTSNSFMPTYGATPWTSEGLNVARLSEQARLIKLQLPQAAPQNAVVVERFTATEGINELFAFTIDTL ATSSEFDPFALIGEELSLRLLLANGSFRTWHGYLTAVDALGGDGGLARYRLHLQPWLAALGLRRDSFVYA AKSVQDIVSEVFADHTTATFTFEVAQELPVRPTCVQYRESDLAFVMRLLTEEGLSFRFEHEQTKDGESGG ANNNGNNNTTPSHHRLVIFDREAKSPDCALPEIRFHRVDATEQQDAITAWSSKRQLVSNAVTLNAWDASV LQAPTGSTQSALAMGDVPVLEHYDGAGSQRYANNAAAARRAENQLVAFESRIKRYSAGGSVRQLGAGERF TLTQHDRYEGQKFVTLRVRHEAANNLGAQAAQVLEAGELEKGSYRNSFEAQPAEAQIAPIWRPKPTAPEA MVALVVGADDDEVPTAVHTQRDHRVQVRFHWQAQRAAAQQQSGQSGQGSLVAAGRHASNRQSVWLRVAAP VAGPNWGAHHLPRVGSEVLVSFIEGDIDRPVVSQQLYNGQDLPPWSAGTDSSANHAGVLSGWHSRALDGS GYNQWIADDAPGQVRTRLASSHATSQLNLGHLNAQSPDESNRGAWRGSGAELRSDAWVVTRAGEGLLIST LAQERAAGSVQDTASVRGQLAGALREAQNLSDAAGGAKALALNATALLQPLIDDIDPQKNGHYPGSVNGQ DAKEPKGGEGADSRQGQDPVPAFARPLMVLDANMSLNMATPASATVYAGEAIHWTAQEQAHMAAGKTVSF AAGKSVGLYSHEGGIQVIAQEGPVSVQAHTDELEWLAKEGFTVTSSNDEIHVLAKQKITLKGGQTSIELD GANITLKMPGLLDVKGASKSFVGPKGSPAELPLLPTGAINEAQHFIELNHHYDDLEPVKGAAYKLIFDNG AVIRGKVDDNGFARHDGVPPGSAKVVWGEDERKWDGESKRPNDRFGAATDADAAIALVKGLMS |
| Nucleotide Sequence: 2922 bp [Download] |
| >gi|319790694|ref|NC_014931.1|:c6007635-6004714 Variovorax paradoxus EPS chromosome, complete genome ATGTCATCAGACACATCAAACAGCTTCATGCCGACCTATGGCGCAACGCCATGGACGTCCGAAGGCCTGA ACGTTGCGCGCCTCTCCGAACAGGCGCGGCTCATCAAGCTGCAATTGCCCCAAGCGGCACCGCAGAACGC CGTCGTCGTCGAGCGCTTCACCGCCACCGAAGGCATCAACGAACTCTTCGCCTTCACCATCGACACCCTC GCCACGTCGAGCGAGTTCGATCCCTTCGCGCTGATCGGCGAGGAGCTGAGCCTGCGCCTGCTGCTCGCCA ACGGCAGCTTCCGCACCTGGCACGGCTACCTCACGGCGGTCGACGCGCTGGGCGGCGATGGCGGCCTCGC GCGCTACCGGCTGCACCTGCAGCCCTGGCTCGCCGCGCTCGGCCTGCGTCGCGACAGCTTCGTGTACGCC GCCAAGAGCGTGCAGGACATCGTGAGCGAGGTGTTCGCCGATCACACCACCGCCACCTTCACCTTCGAAG TCGCCCAAGAGTTGCCCGTGCGGCCGACCTGCGTGCAGTACCGCGAGTCGGACCTCGCCTTCGTGATGCG TCTGCTCACGGAGGAGGGTTTGAGCTTTCGCTTCGAGCACGAGCAGACGAAAGATGGCGAGAGCGGCGGC GCCAATAACAACGGCAACAACAACACGACGCCATCGCACCATCGCCTGGTGATCTTTGATCGCGAAGCGA AGTCGCCCGATTGCGCACTGCCCGAGATCCGCTTCCACCGCGTCGACGCCACCGAGCAGCAGGACGCGAT CACCGCATGGAGCAGCAAGCGCCAGCTCGTCAGCAACGCCGTGACGCTGAACGCGTGGGATGCCAGCGTG CTGCAGGCGCCCACCGGCTCGACGCAGAGCGCGCTCGCCATGGGCGACGTGCCTGTGCTGGAGCACTACG ACGGCGCGGGCTCCCAGCGCTACGCCAACAACGCCGCCGCCGCGCGGCGCGCCGAGAACCAGCTGGTGGC GTTCGAGTCGCGCATCAAGCGCTACAGCGCCGGGGGCAGCGTGCGGCAGCTGGGCGCCGGCGAGCGCTTC ACGCTCACGCAGCACGACCGCTACGAGGGCCAGAAATTCGTCACGCTGCGCGTGCGCCACGAAGCCGCCA ACAACCTCGGCGCGCAGGCCGCGCAGGTGCTCGAGGCCGGCGAGCTCGAGAAGGGCAGCTATCGCAACAG CTTCGAGGCGCAGCCAGCCGAAGCGCAGATCGCGCCGATCTGGCGGCCCAAGCCCACGGCGCCCGAGGCG ATGGTCGCACTCGTGGTCGGCGCTGATGACGACGAGGTGCCGACGGCGGTTCACACGCAGCGCGATCACC GCGTGCAGGTGCGCTTTCATTGGCAGGCGCAGCGGGCGGCAGCGCAACAGCAGTCGGGGCAGAGCGGGCA AGGCAGTCTTGTCGCGGCGGGCCGGCATGCGAGCAATCGCCAGTCGGTATGGCTGCGCGTGGCCGCGCCG GTGGCCGGGCCGAACTGGGGCGCGCACCATCTGCCGCGCGTCGGCTCGGAGGTGCTGGTGTCGTTCATCG AAGGCGACATCGACCGGCCAGTGGTGAGCCAGCAGCTCTACAACGGACAGGATCTGCCGCCATGGTCCGC AGGCACCGATTCGTCGGCCAACCACGCGGGCGTGCTCTCGGGCTGGCACAGCCGTGCGCTCGACGGCAGC GGCTACAACCAATGGATCGCGGACGACGCGCCCGGGCAGGTGCGCACGCGCCTCGCCAGTTCGCATGCGA CGAGCCAGCTGAACCTGGGGCATCTCAACGCGCAATCGCCCGACGAGAGCAATCGCGGTGCGTGGCGTGG CAGCGGTGCCGAACTGCGCTCGGATGCGTGGGTCGTCACGCGCGCTGGCGAAGGGCTCTTGATTTCGACG CTGGCGCAGGAGCGGGCCGCTGGCAGCGTGCAGGACACTGCGAGCGTGCGCGGTCAGTTGGCCGGTGCGT TGCGCGAGGCGCAGAACCTGTCGGATGCCGCCGGTGGCGCCAAGGCACTGGCATTGAATGCGACGGCATT GCTGCAGCCGCTCATCGACGACATCGATCCGCAGAAGAACGGGCACTACCCCGGCAGCGTCAATGGTCAG GACGCGAAGGAGCCAAAGGGCGGCGAGGGGGCAGATTCACGTCAAGGTCAGGACCCGGTGCCAGCCTTCG CTCGGCCACTCATGGTGCTGGACGCGAACATGAGCCTGAACATGGCCACGCCCGCGAGCGCGACGGTGTA TGCGGGCGAGGCGATCCACTGGACCGCGCAGGAGCAGGCGCACATGGCGGCGGGCAAGACGGTGAGTTTT GCGGCGGGCAAGTCGGTGGGGCTCTACAGCCACGAAGGCGGCATCCAGGTCATCGCGCAGGAGGGGCCGG TGAGCGTGCAGGCGCATACCGATGAACTCGAATGGCTCGCGAAGGAGGGCTTCACGGTCACGAGCAGCAA CGACGAGATCCACGTGCTGGCCAAGCAGAAGATCACGCTCAAGGGCGGGCAGACGAGCATCGAGCTGGAT GGGGCGAACATCACGTTGAAGATGCCGGGGCTCTTGGATGTGAAGGGGGCGAGCAAGAGTTTTGTGGGGC CGAAGGGGAGCCCGGCGGAGTTGCCACTCTTGCCTACCGGGGCAATCAACGAAGCCCAGCATTTCATCGA GTTGAATCACCACTATGACGATCTGGAGCCCGTCAAAGGTGCGGCCTACAAGCTGATCTTCGACAACGGC GCGGTTATCCGCGGAAAGGTCGATGACAACGGATTCGCGCGCCATGACGGCGTGCCGCCGGGATCGGCGA AAGTCGTCTGGGGCGAGGACGAGCGCAAGTGGGACGGCGAATCGAAGCGACCGAATGACCGCTTCGGTGC GGCCACGGATGCCGATGCGGCCATTGCACTGGTGAAAGGGTTGATGTCGTGA |