SecReT6
Protein ID: 319796153
SecReT6 ID420
T6SS typei4b
Gene symbol-
Locus tagVarpa_5527
StrainVariovorax paradoxus EPS
Repliconchromosome [GenBank: NC_014931] [Browse all T6SS(s) in this replicon]
Location [Strand]6012977..6015805 [-]
Producttype VI secretion system vgr family protein
NoteTssI
UniProt IDE6VAD8
KEGG IDvpe:Varpa_5527
PDB IDNA
Domain hit(s) vs Pfam Phage_GPD [PF05954], Evalue: 7.60E-73, Aligned region: 44..362
Phage_GPD [PF05954], Evalue: 7.60E-73, Aligned region: 396..533
Phage_GPD [PF05954], Evalue: 7.60E-73, Aligned region: 611..708
DUF2345 [PF10106], Evalue: 2.60E-42, Aligned region: 646..670
DUF2345 [PF10106], Evalue: 2.60E-42, Aligned region: 749..912
T6SS_Vgr [PF13296], Evalue: 1.50E-31, Aligned region: 211..245
T6SS_Vgr [PF13296], Evalue: 1.50E-31, Aligned region: 592..698
T6SS_Vgr [PF13296], Evalue: 1.50E-31, Aligned region: 818..862
Phage_base_V [PF04717], Evalue: 2.40E-18, Aligned region: 436..540
Sarcoglycan_1 [PF04790], Evalue: 0.0005, Aligned region: 763..848
Sarcoglycan_1 [PF04790], Evalue: 0.0005, Aligned region: 842..895
Protein Sequence: 942 a.a.     [Download]
>gi|319796153|ref|YP_004157793.1| type VI secretion system vgr family protein [Variovorax paradoxus EPS]
MTTFSTASLGGLLRARTTQQDRLLVLHTPLGANKLLAERFDGVESLDDGGFRFELTALSDDAHIELKTLM
GQGVRLDLQTAQSRTELRPFHGYVTEAECVASNGGMARYRIVIEPWLAFLRLRQDSCLFQHQSVFDIVDA
VFTRYQSQGKLAVQWRWEIAQRDIYPVRGITTQYHESDFDFVARLLAEEGLCYWFEHATGKDGDLGSHTL
VIADHNGAFRANTQATIRFHRADASEREDTIQQWRGSRQLQTNSLAQQSWDYKSVSARPVQQQSRGAGHR
TLQWSDDPGAYGWETSAQGERLLSNALQALELRNKRFEGQSAVRSLAPATTFTLSGHEQHDKDGEEDRRF
AVLAVRHIARNNFDEALKAGVGDRLGLPDIAAVFDASEDSGNAAAKPDTVTHYRNDFTTVRAAIPYRPLS
MDGHGQRIHPKPSVHGSQSAIVIGVGENAPVHTDRDHRVKVQFHWQRGSGSSARQPRPDGQDNAPAADRL
GAWVRVAASAAGDNWGQVTLPRVGQEVLVEFHHGDIDRPVVVAALYNGAGQIDAQHNEKSAGAAQSTGNA
PAWFAGEGKEAKEHAHNAVFSGIKTQELSASQSGDGGYNQLVFDDTPGQGSTSLATTQAMSRLHLGHHKQ
QDDNARGKARGHGAELATTAQGAIRAGSGLLVSAHAQQNAKGAFMASREAQQQTKQAEELATSLAKSAQT
QKAQLKGEEAPDKLPAIEALKHVAEVLGATQEGASASGVNGSGGDIKATEGGQGSVTAYSEPHLQFSAPM
GIGFVTPKEAIAVSGKNTAIVANQDIDLPAQGQIAVSVAKGVSLYTVGAKAGEGGEPNQERGIALHAASG
SVTLQSQKGATKIAADKKVTIASTTKNVDVEAPKHVLLTSAGAYIKLEGSSIKIHAPGKVTFRGMHNFVG
PQGDSSSNALSGSDQQPCPKQDDAAASGAVAF
 
Nucleotide Sequence: 2829 bp     [Download]
>gi|319790694|ref|NC_014931.1|:c6015805-6012977 Variovorax paradoxus EPS chromosome, complete genome
ATGACGACCTTCTCAACGGCTTCGCTTGGTGGCTTGCTGCGTGCACGCACGACGCAGCAGGATCGCCTGC
TGGTGCTGCACACGCCGCTGGGTGCCAACAAGCTGCTGGCCGAGCGCTTTGATGGCGTGGAGTCTTTGGA
CGATGGCGGCTTCCGCTTCGAACTCACCGCGTTGAGCGACGACGCGCACATCGAACTCAAGACGTTGATG
GGGCAGGGCGTGCGTCTTGATCTGCAGACCGCGCAAAGCCGTACCGAACTGCGCCCCTTCCACGGGTACG
TGACCGAGGCCGAATGTGTTGCGAGCAACGGCGGCATGGCCCGCTATCGCATCGTCATCGAACCCTGGCT
CGCATTCCTGCGCCTACGCCAGGACAGTTGCCTCTTCCAGCACCAAAGCGTGTTCGACATCGTCGATGCC
GTGTTCACGCGGTACCAAAGCCAGGGCAAGCTGGCCGTGCAATGGCGCTGGGAGATTGCCCAGCGGGACA
TCTATCCCGTGCGCGGCATCACCACCCAGTACCACGAGAGCGATTTCGATTTCGTTGCGCGGCTGCTCGC
CGAAGAAGGCCTGTGCTACTGGTTCGAACACGCCACCGGCAAGGACGGCGACCTGGGCAGCCACACTCTC
GTCATCGCCGACCACAACGGCGCCTTCCGCGCGAACACGCAAGCCACCATCCGCTTTCACCGCGCCGACG
CGAGCGAGCGCGAAGACACCATCCAGCAATGGCGCGGCAGTCGCCAATTGCAGACCAACAGCCTCGCGCA
GCAGAGCTGGGACTACAAGAGCGTGAGCGCCAGGCCCGTGCAGCAGCAAAGCCGCGGCGCAGGCCACCGC
ACCCTGCAGTGGAGCGACGACCCCGGTGCCTACGGTTGGGAGACCTCCGCCCAAGGCGAACGGCTGTTGT
CCAACGCCTTGCAAGCCTTGGAGCTGCGCAACAAACGCTTCGAAGGCCAGAGCGCCGTGCGCAGCCTCGC
ACCCGCCACCACCTTCACGCTGAGCGGCCACGAGCAGCACGACAAGGACGGAGAAGAAGACCGCCGCTTC
GCTGTGCTGGCCGTGCGCCACATCGCGCGCAACAACTTCGACGAAGCCTTGAAGGCCGGTGTCGGTGATC
GCCTCGGACTGCCCGACATCGCCGCCGTGTTCGATGCATCGGAGGACAGCGGCAATGCCGCAGCCAAGCC
CGACACGGTCACTCACTACCGCAACGACTTCACGACAGTGCGCGCGGCCATTCCCTATCGCCCGCTGAGC
ATGGACGGCCACGGCCAGCGCATTCACCCCAAGCCCAGCGTGCACGGCAGCCAGAGCGCCATCGTGATTG
GCGTGGGTGAGAACGCTCCCGTGCACACCGACCGCGACCACCGCGTCAAGGTGCAGTTCCACTGGCAGCG
TGGCAGCGGCTCCAGCGCAAGACAACCCCGCCCCGACGGCCAGGACAATGCGCCCGCCGCGGATCGATTG
GGCGCCTGGGTGCGCGTGGCCGCCAGCGCTGCGGGCGACAACTGGGGCCAGGTCACGCTGCCGCGTGTGG
GGCAGGAGGTGCTGGTCGAATTCCACCATGGCGACATCGACCGCCCCGTCGTCGTTGCGGCCCTCTACAA
CGGTGCTGGGCAGATCGATGCCCAGCACAACGAGAAGTCCGCAGGCGCGGCGCAGTCCACAGGCAACGCC
CCCGCCTGGTTCGCGGGTGAAGGCAAGGAAGCCAAGGAGCACGCGCACAACGCCGTCTTCTCGGGCATCA
AGACCCAGGAGTTGAGTGCCAGCCAGAGCGGTGATGGCGGCTACAACCAGCTGGTCTTCGACGACACGCC
TGGGCAGGGCAGCACGAGCCTCGCGACCACGCAGGCCATGAGCCGGCTGCACCTGGGGCACCACAAGCAG
CAGGACGACAACGCGCGCGGCAAGGCGCGGGGGCATGGAGCGGAGCTGGCGACCACCGCACAGGGTGCCA
TCCGGGCCGGATCTGGATTGCTCGTGAGCGCGCATGCGCAGCAGAACGCCAAGGGTGCGTTCATGGCCAG
TCGCGAGGCGCAGCAGCAGACGAAGCAGGCCGAAGAGCTGGCCACTTCACTCGCGAAGAGTGCGCAGACG
CAGAAGGCGCAGCTCAAAGGTGAAGAGGCGCCGGACAAGCTGCCGGCCATCGAGGCACTGAAGCACGTGG
CCGAGGTGCTCGGGGCGACGCAGGAGGGCGCGTCAGCAAGCGGAGTAAACGGCAGCGGCGGCGACATCAA
AGCCACCGAAGGCGGGCAGGGCAGCGTCACTGCATACAGCGAGCCGCACCTGCAGTTCAGCGCGCCCATG
GGCATCGGCTTCGTCACGCCGAAGGAGGCGATTGCGGTGAGCGGCAAGAACACCGCCATCGTCGCCAACC
AGGACATCGACTTGCCCGCGCAGGGGCAGATCGCGGTGAGCGTAGCCAAGGGGGTGAGCCTGTACACCGT
GGGTGCGAAAGCCGGAGAAGGCGGCGAGCCGAATCAGGAGCGCGGCATCGCGCTGCACGCAGCCAGCGGC
AGCGTGACGCTGCAGAGCCAAAAGGGGGCCACGAAGATCGCGGCCGACAAGAAGGTCACGATCGCCAGCA
CGACGAAGAACGTCGATGTGGAGGCGCCCAAACACGTGCTGCTGACAAGCGCCGGGGCCTACATCAAGCT
CGAGGGCTCGAGCATCAAGATCCATGCGCCGGGGAAGGTGACGTTCAGGGGGATGCACAACTTCGTCGGG
CCGCAAGGGGACAGCAGCAGCAACGCGCTCTCCGGCAGTGACCAGCAACCCTGCCCCAAACAAGACGACG
CCGCGGCCAGCGGCGCCGTCGCCTTTTGA