| Protein ID: 319796153 |
 SecReT6 ID | 420 |
| T6SS type | i4b |
| Gene symbol | - |
| Locus tag | Varpa_5527 |
| Strain | Variovorax paradoxus EPS |
| Replicon | chromosome [GenBank: NC_014931] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 6012977..6015805 [-] |
| Product | type VI secretion system vgr family protein |
| Note | TssI |
| UniProt ID | E6VAD8 |
| KEGG ID | vpe:Varpa_5527 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 7.60E-73, Aligned region: 44..362 Phage_GPD [PF05954], Evalue: 7.60E-73, Aligned region: 396..533 Phage_GPD [PF05954], Evalue: 7.60E-73, Aligned region: 611..708 DUF2345 [PF10106], Evalue: 2.60E-42, Aligned region: 646..670 DUF2345 [PF10106], Evalue: 2.60E-42, Aligned region: 749..912 T6SS_Vgr [PF13296], Evalue: 1.50E-31, Aligned region: 211..245 T6SS_Vgr [PF13296], Evalue: 1.50E-31, Aligned region: 592..698 T6SS_Vgr [PF13296], Evalue: 1.50E-31, Aligned region: 818..862 Phage_base_V [PF04717], Evalue: 2.40E-18, Aligned region: 436..540 Sarcoglycan_1 [PF04790], Evalue: 0.0005, Aligned region: 763..848 Sarcoglycan_1 [PF04790], Evalue: 0.0005, Aligned region: 842..895 |
| Protein Sequence: 942 a.a. [Download] |
| >gi|319796153|ref|YP_004157793.1| type VI secretion system vgr family protein [Variovorax paradoxus EPS] MTTFSTASLGGLLRARTTQQDRLLVLHTPLGANKLLAERFDGVESLDDGGFRFELTALSDDAHIELKTLM GQGVRLDLQTAQSRTELRPFHGYVTEAECVASNGGMARYRIVIEPWLAFLRLRQDSCLFQHQSVFDIVDA VFTRYQSQGKLAVQWRWEIAQRDIYPVRGITTQYHESDFDFVARLLAEEGLCYWFEHATGKDGDLGSHTL VIADHNGAFRANTQATIRFHRADASEREDTIQQWRGSRQLQTNSLAQQSWDYKSVSARPVQQQSRGAGHR TLQWSDDPGAYGWETSAQGERLLSNALQALELRNKRFEGQSAVRSLAPATTFTLSGHEQHDKDGEEDRRF AVLAVRHIARNNFDEALKAGVGDRLGLPDIAAVFDASEDSGNAAAKPDTVTHYRNDFTTVRAAIPYRPLS MDGHGQRIHPKPSVHGSQSAIVIGVGENAPVHTDRDHRVKVQFHWQRGSGSSARQPRPDGQDNAPAADRL GAWVRVAASAAGDNWGQVTLPRVGQEVLVEFHHGDIDRPVVVAALYNGAGQIDAQHNEKSAGAAQSTGNA PAWFAGEGKEAKEHAHNAVFSGIKTQELSASQSGDGGYNQLVFDDTPGQGSTSLATTQAMSRLHLGHHKQ QDDNARGKARGHGAELATTAQGAIRAGSGLLVSAHAQQNAKGAFMASREAQQQTKQAEELATSLAKSAQT QKAQLKGEEAPDKLPAIEALKHVAEVLGATQEGASASGVNGSGGDIKATEGGQGSVTAYSEPHLQFSAPM GIGFVTPKEAIAVSGKNTAIVANQDIDLPAQGQIAVSVAKGVSLYTVGAKAGEGGEPNQERGIALHAASG SVTLQSQKGATKIAADKKVTIASTTKNVDVEAPKHVLLTSAGAYIKLEGSSIKIHAPGKVTFRGMHNFVG PQGDSSSNALSGSDQQPCPKQDDAAASGAVAF |
| Nucleotide Sequence: 2829 bp [Download] |
| >gi|319790694|ref|NC_014931.1|:c6015805-6012977 Variovorax paradoxus EPS chromosome, complete genome ATGACGACCTTCTCAACGGCTTCGCTTGGTGGCTTGCTGCGTGCACGCACGACGCAGCAGGATCGCCTGC TGGTGCTGCACACGCCGCTGGGTGCCAACAAGCTGCTGGCCGAGCGCTTTGATGGCGTGGAGTCTTTGGA CGATGGCGGCTTCCGCTTCGAACTCACCGCGTTGAGCGACGACGCGCACATCGAACTCAAGACGTTGATG GGGCAGGGCGTGCGTCTTGATCTGCAGACCGCGCAAAGCCGTACCGAACTGCGCCCCTTCCACGGGTACG TGACCGAGGCCGAATGTGTTGCGAGCAACGGCGGCATGGCCCGCTATCGCATCGTCATCGAACCCTGGCT CGCATTCCTGCGCCTACGCCAGGACAGTTGCCTCTTCCAGCACCAAAGCGTGTTCGACATCGTCGATGCC GTGTTCACGCGGTACCAAAGCCAGGGCAAGCTGGCCGTGCAATGGCGCTGGGAGATTGCCCAGCGGGACA TCTATCCCGTGCGCGGCATCACCACCCAGTACCACGAGAGCGATTTCGATTTCGTTGCGCGGCTGCTCGC CGAAGAAGGCCTGTGCTACTGGTTCGAACACGCCACCGGCAAGGACGGCGACCTGGGCAGCCACACTCTC GTCATCGCCGACCACAACGGCGCCTTCCGCGCGAACACGCAAGCCACCATCCGCTTTCACCGCGCCGACG CGAGCGAGCGCGAAGACACCATCCAGCAATGGCGCGGCAGTCGCCAATTGCAGACCAACAGCCTCGCGCA GCAGAGCTGGGACTACAAGAGCGTGAGCGCCAGGCCCGTGCAGCAGCAAAGCCGCGGCGCAGGCCACCGC ACCCTGCAGTGGAGCGACGACCCCGGTGCCTACGGTTGGGAGACCTCCGCCCAAGGCGAACGGCTGTTGT CCAACGCCTTGCAAGCCTTGGAGCTGCGCAACAAACGCTTCGAAGGCCAGAGCGCCGTGCGCAGCCTCGC ACCCGCCACCACCTTCACGCTGAGCGGCCACGAGCAGCACGACAAGGACGGAGAAGAAGACCGCCGCTTC GCTGTGCTGGCCGTGCGCCACATCGCGCGCAACAACTTCGACGAAGCCTTGAAGGCCGGTGTCGGTGATC GCCTCGGACTGCCCGACATCGCCGCCGTGTTCGATGCATCGGAGGACAGCGGCAATGCCGCAGCCAAGCC CGACACGGTCACTCACTACCGCAACGACTTCACGACAGTGCGCGCGGCCATTCCCTATCGCCCGCTGAGC ATGGACGGCCACGGCCAGCGCATTCACCCCAAGCCCAGCGTGCACGGCAGCCAGAGCGCCATCGTGATTG GCGTGGGTGAGAACGCTCCCGTGCACACCGACCGCGACCACCGCGTCAAGGTGCAGTTCCACTGGCAGCG TGGCAGCGGCTCCAGCGCAAGACAACCCCGCCCCGACGGCCAGGACAATGCGCCCGCCGCGGATCGATTG GGCGCCTGGGTGCGCGTGGCCGCCAGCGCTGCGGGCGACAACTGGGGCCAGGTCACGCTGCCGCGTGTGG GGCAGGAGGTGCTGGTCGAATTCCACCATGGCGACATCGACCGCCCCGTCGTCGTTGCGGCCCTCTACAA CGGTGCTGGGCAGATCGATGCCCAGCACAACGAGAAGTCCGCAGGCGCGGCGCAGTCCACAGGCAACGCC CCCGCCTGGTTCGCGGGTGAAGGCAAGGAAGCCAAGGAGCACGCGCACAACGCCGTCTTCTCGGGCATCA AGACCCAGGAGTTGAGTGCCAGCCAGAGCGGTGATGGCGGCTACAACCAGCTGGTCTTCGACGACACGCC TGGGCAGGGCAGCACGAGCCTCGCGACCACGCAGGCCATGAGCCGGCTGCACCTGGGGCACCACAAGCAG CAGGACGACAACGCGCGCGGCAAGGCGCGGGGGCATGGAGCGGAGCTGGCGACCACCGCACAGGGTGCCA TCCGGGCCGGATCTGGATTGCTCGTGAGCGCGCATGCGCAGCAGAACGCCAAGGGTGCGTTCATGGCCAG TCGCGAGGCGCAGCAGCAGACGAAGCAGGCCGAAGAGCTGGCCACTTCACTCGCGAAGAGTGCGCAGACG CAGAAGGCGCAGCTCAAAGGTGAAGAGGCGCCGGACAAGCTGCCGGCCATCGAGGCACTGAAGCACGTGG CCGAGGTGCTCGGGGCGACGCAGGAGGGCGCGTCAGCAAGCGGAGTAAACGGCAGCGGCGGCGACATCAA AGCCACCGAAGGCGGGCAGGGCAGCGTCACTGCATACAGCGAGCCGCACCTGCAGTTCAGCGCGCCCATG GGCATCGGCTTCGTCACGCCGAAGGAGGCGATTGCGGTGAGCGGCAAGAACACCGCCATCGTCGCCAACC AGGACATCGACTTGCCCGCGCAGGGGCAGATCGCGGTGAGCGTAGCCAAGGGGGTGAGCCTGTACACCGT GGGTGCGAAAGCCGGAGAAGGCGGCGAGCCGAATCAGGAGCGCGGCATCGCGCTGCACGCAGCCAGCGGC AGCGTGACGCTGCAGAGCCAAAAGGGGGCCACGAAGATCGCGGCCGACAAGAAGGTCACGATCGCCAGCA CGACGAAGAACGTCGATGTGGAGGCGCCCAAACACGTGCTGCTGACAAGCGCCGGGGCCTACATCAAGCT CGAGGGCTCGAGCATCAAGATCCATGCGCCGGGGAAGGTGACGTTCAGGGGGATGCACAACTTCGTCGGG CCGCAAGGGGACAGCAGCAGCAACGCGCTCTCCGGCAGTGACCAGCAACCCTGCCCCAAACAAGACGACG CCGCGGCCAGCGGCGCCGTCGCCTTTTGA |