| Protein ID: 319796156 |
 SecReT6 ID | 420 |
| T6SS type | i4b |
| Gene symbol | - |
| Locus tag | Varpa_5530 |
| Strain | Variovorax paradoxus EPS |
| Replicon | chromosome [GenBank: NC_014931] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 6019714..6021564 [-] |
| Product | type VI secretion protein |
| Note | TssF |
| UniProt ID | E6VAE1 |
| KEGG ID | vpe:Varpa_5530 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | DUF879 [PF05947], Evalue: 2.40E-206, Aligned region: 4..616 |
| Protein Sequence: 616 a.a. [Download] |
| >gi|319796156|ref|YP_004157796.1| type VI secretion protein [Variovorax paradoxus EPS] MDELLPFYERELAFLRGYSQEFAKGYPKIAARLAISADSSEDPHVERMIQSFALLTARISKKLDDDYPEL TEALLEVLYPHYLRPFPSCSIAQFDAGGAALAKLSKPVTIARGTELTSQPVRGGACRFRSVYDVTLAAVQ VSNVVFHSVVNAPAHASLPRNATGCLSITLEATGEQKSLGTLALTMARLRTFIDAEPSLATALADVIFLK TAAVFVEPERSGKWTQVQGEALHPVGFDEADALIELPPRSHPAYRLLSEYFAFPEKFNFVDIDLANALRH IGSCRSITLHLVMTGVRADSPTARLLEGVSSRNLRLGCTPVINLFKQRSDPIRVTHAAAAYPVVADARRA FGFEVYSIDSVKLVKQTAEGDAYIEFRPFYSLHHGEHPKEAEHYWFARRNELVAQKSPGYETELSIVDID FQPSLPQTETLSIDLTCTNRDLPHSLAFGLPGGDLFIEGNSVARSIRMLRRPTQTLRMPRGKGVQWRLVS HLSLNHLSLATSGLPALKEMLRLYDLGRSAVSARQIEAITGIDQQATTQWLPGKPFATFVRGIELKLTVD EAGFVGSSLQAFARVMDHFFGLYVHLNSFTQLVIVSARDKEELVRCKPRSGESILL |
| Nucleotide Sequence: 1851 bp [Download] |
| >gi|319790694|ref|NC_014931.1|:c6021564-6019714 Variovorax paradoxus EPS chromosome, complete genome ATGGATGAATTGCTGCCCTTCTACGAACGAGAGCTTGCGTTCCTGCGCGGCTACTCGCAAGAGTTCGCCA AGGGCTACCCCAAGATCGCGGCGCGCCTGGCCATCTCCGCCGACAGCAGCGAGGACCCGCACGTCGAGCG GATGATCCAGTCGTTCGCGCTGCTCACCGCGCGCATCAGCAAGAAGCTCGACGACGACTACCCCGAGCTC ACCGAGGCGCTGCTCGAGGTGCTGTACCCGCACTACCTGCGGCCGTTTCCTTCGTGCTCGATCGCGCAGT TCGATGCCGGCGGCGCGGCGCTCGCGAAGCTGAGCAAGCCCGTCACCATCGCGCGCGGCACCGAGCTCAC CTCGCAGCCGGTGCGCGGCGGCGCGTGCCGCTTTCGCAGCGTCTACGACGTGACGCTGGCAGCCGTGCAG GTGTCCAACGTGGTGTTCCATTCGGTGGTGAATGCGCCCGCGCATGCCTCGCTGCCGCGCAACGCCACGG GATGCCTCTCGATCACGCTCGAAGCCACCGGCGAGCAGAAGTCGCTCGGCACGCTCGCGCTCACCATGGC GCGCTTGCGCACCTTCATCGACGCCGAGCCCTCGCTCGCCACCGCGCTGGCCGATGTGATCTTCCTGAAG ACGGCCGCCGTTTTCGTGGAGCCCGAGCGCAGCGGCAAATGGACGCAGGTGCAGGGCGAGGCGCTGCATC CGGTCGGCTTCGACGAGGCCGATGCGCTCATCGAGCTGCCGCCGCGTTCGCACCCCGCCTACCGGCTGCT GAGCGAATACTTTGCGTTCCCCGAGAAGTTCAACTTCGTCGACATCGACCTGGCGAACGCGCTGCGCCAC ATCGGCTCGTGCCGCTCGATCACGCTGCACCTCGTGATGACCGGCGTGCGCGCCGATTCGCCCACGGCGC GTTTGCTCGAAGGCGTGTCCAGCCGCAACCTGCGCCTGGGCTGCACGCCCGTCATCAACCTCTTCAAGCA GCGCAGCGATCCGATCCGCGTGACGCACGCCGCGGCCGCATATCCGGTGGTGGCCGATGCGCGCCGGGCC TTCGGCTTCGAGGTCTACAGCATCGACTCGGTCAAGCTCGTGAAGCAGACCGCCGAGGGCGACGCCTACA TCGAGTTTCGCCCTTTCTACTCGCTGCATCACGGCGAGCATCCGAAGGAAGCCGAGCACTACTGGTTCGC GCGGCGCAACGAACTGGTGGCGCAGAAGAGCCCGGGCTACGAGACCGAGCTCTCGATCGTCGACATCGAC TTCCAGCCCTCGCTGCCGCAAACGGAAACGCTGAGCATCGACCTCACCTGCACCAACCGCGACCTGCCGC ATTCGCTGGCGTTCGGCCTGCCGGGCGGCGACCTGTTCATCGAGGGCAACTCGGTGGCGCGCTCGATCCG CATGCTGCGCCGCCCCACGCAGACGCTGCGCATGCCGCGCGGCAAGGGCGTGCAGTGGCGGCTGGTGTCG CACCTGTCGCTCAACCACCTGTCGCTGGCCACCAGCGGATTGCCGGCACTCAAGGAGATGCTGCGCCTGT ACGACCTCGGCCGATCCGCCGTGTCGGCGCGGCAGATCGAGGCCATCACCGGCATCGACCAGCAGGCCAC CACGCAGTGGCTGCCGGGCAAGCCCTTCGCCACCTTCGTGCGCGGCATCGAACTCAAGCTCACGGTCGAC GAGGCCGGCTTCGTCGGCAGCAGCCTGCAGGCTTTTGCGCGCGTGATGGATCATTTCTTCGGTCTCTATG TGCACCTGAACAGCTTCACCCAGCTGGTGATCGTTTCGGCGCGCGACAAGGAGGAGCTGGTGCGATGCAA ACCCCGCAGCGGCGAATCGATCCTGCTGTAG |