| Protein ID: 319796158 |
 SecReT6 ID | 420 |
| T6SS type | i4b |
| Gene symbol | - |
| Locus tag | Varpa_5532 |
| Strain | Variovorax paradoxus EPS |
| Replicon | chromosome [GenBank: NC_014931] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 6022177..6022689 [-] |
| Product | type VI secretion system effector, hcp1 family |
| Note | TssD |
| UniProt ID | E6VAE3 |
| KEGG ID | vpe:Varpa_5532 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | DUF796 [PF05638], Evalue: 1.40E-43, Aligned region: 5..143 |
| Protein Sequence: 170 a.a. [Download] |
| >gi|319796158|ref|YP_004157798.1| type VI secretion system effector, hcp1 family [Variovorax paradoxus EPS] MKDIYVKFGSPAINGESQDKDHKDWVEVSSWQHSIVQPRSATASTAGGHTAERCEHGEMIFTKDMDVVSP LLYQHASGGTTFDEVTVQFYRADGEGKRVQYMEIKLKYVLIASVNPKVVSNDVASVPSETFSLKYAAVQW KYTQQKIGGNQGGNSQGAWSLTKNDKTYSV |
| Nucleotide Sequence: 513 bp [Download] |
| >gi|319790694|ref|NC_014931.1|:c6022689-6022177 Variovorax paradoxus EPS chromosome, complete genome ATGAAGGATATCTACGTCAAGTTCGGCAGCCCGGCCATCAACGGCGAGTCGCAGGACAAGGACCACAAGG ACTGGGTCGAGGTCAGCTCCTGGCAGCACAGCATCGTGCAGCCGCGTTCGGCCACCGCATCGACCGCCGG CGGCCACACCGCCGAGCGCTGCGAGCACGGCGAAATGATCTTCACCAAGGACATGGACGTGGTCAGCCCG CTGCTGTATCAGCACGCTTCGGGCGGCACCACCTTCGACGAGGTGACCGTGCAGTTCTACCGCGCCGACG GCGAAGGCAAGCGCGTGCAGTACATGGAGATCAAGCTCAAGTACGTGCTGATCGCCAGCGTGAACCCGAA GGTCGTGAGCAACGACGTGGCCAGCGTGCCGAGCGAGACCTTCTCGCTGAAGTACGCCGCCGTGCAGTGG AAGTACACGCAGCAAAAAATCGGCGGCAACCAGGGCGGCAATTCGCAAGGCGCCTGGAGCCTGACCAAGA ACGACAAGACCTACTCGGTCTGA |