| Protein ID: 322835252 |
 SecReT6 ID | 422 |
| T6SS type | i2 |
| Gene symbol | - |
| Locus tag | Rahaq_4570 |
| Strain | Rahnella sp. Y9602 |
| Replicon | plasmid pRAHAQ01 [GenBank: NC_015062] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 133664..136006 [+] |
| Product | Rhs element Vgr protein |
| Note | TssI |
| UniProt ID | E8Y0Y5 |
| KEGG ID | rah:Rahaq_4570 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 2.00E-66, Aligned region: 35..349 DUF2345 [PF10106], Evalue: 4.00E-39, Aligned region: 265..291 DUF2345 [PF10106], Evalue: 4.00E-39, Aligned region: 569..569 DUF2345 [PF10106], Evalue: 4.00E-39, Aligned region: 605..745 T6SS_Vgr [PF13296], Evalue: 2.50E-34, Aligned region: 481..586 T6SS_Vgr [PF13296], Evalue: 2.50E-34, Aligned region: 622..644 Phage_base_V [PF04717], Evalue: 1.20E-14, Aligned region: 395..476 |
| Protein Sequence: 780 a.a. [Download] |
| >gi|322835252|ref|YP_004215278.1| Rhs element Vgr protein [Rahnella sp. Y9602] MSTSDVINRLLNQSRYRLDVLQSPAFLDVLRFEGEEQLSKPFEYIIHVTSTATDLTAEQLVLKPATFTMQ APVFDIAGVAEPVRAVHGVIQHFSRISTSADQTIYRLVLVPRVALLDHTAKCALYLNQSVQEVVEKVLRA HGLEGPDFEFQLSRQYPARELITQWRETDLAFIQRLLAEVGIYWHLEMDTRLEHDVIIFADSQQQYKFGV RLPLRNQAGMSDSGTESVWGLSTQHQVVTQQVSTRDYNYREALSPMDTTASAAGGDETTTGEVYQYAEPF LQSGSEDGVETGAFYARLRHERIMNAQKTVTGHSSCPHLAPGQVLEVDGTLPSVLNEGILLTGIKTYGSR KSRFTAQLTGQPYSETLCFRPVLPERPVIAGTLPARVESTTKGDIYSWLDNQGRYRVKLDFDRDEQEQGY ACLWLRMAKPYAGDTYGWHAPLLDGTEVAIAFDSGDCDRPYIAYALHDSAHSDHVTDDNHTRNVLRTPSF NKLRMEDKRSEEHIKLATEFGKTQLNMGHLVDAERAQRGAGFEIRTDEHGVMRAGKGIFVSAEEQLKAQG KVLDMDPALGQIHQANNEMQALSDAAMQATALASDIQKQLSFVDNRLTQLQSAAILASAPMGVALTSGEH LQLAARQNLMVNAGNNADVGVMKNLFIGAGEALSMFVHKQDATLIANQGQVTIQAQNNAMSLTARQTLTI TSSDDEIIITTPKKLTLNGGGSYLTLEASKIEHGSSGDMTIKCTNYLVPMVGASKPSDTPKFPIVTMENL TEENGKDFSG |
| Nucleotide Sequence: 2343 bp [Download] |
| >gi|322835126|ref|NC_015062.1|:133664-136006 Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence ATGAGCACCTCCGATGTTATCAACAGATTGCTAAACCAGTCCCGCTATCGTCTGGACGTTTTGCAAAGTC CTGCATTTCTCGACGTGTTGCGCTTCGAAGGGGAAGAGCAACTTAGCAAACCCTTTGAATATATTATTCA TGTCACCAGCACGGCCACCGATTTAACCGCTGAACAACTGGTTCTCAAACCGGCTACCTTTACCATGCAG GCTCCCGTGTTTGATATTGCAGGCGTTGCGGAGCCGGTCCGGGCTGTACACGGTGTGATTCAACATTTTT CACGTATCTCTACCTCTGCGGATCAGACGATTTACCGGCTGGTTTTGGTTCCGCGCGTAGCCTTACTGGA CCACACTGCAAAGTGCGCACTTTATCTAAATCAGTCAGTGCAGGAAGTGGTTGAAAAGGTTCTTCGGGCA CACGGCCTGGAAGGCCCGGACTTCGAATTCCAGCTTTCCAGGCAATACCCGGCACGTGAGCTTATCACCC AGTGGCGGGAAACAGATTTAGCTTTCATCCAGCGTTTACTGGCTGAAGTCGGAATTTACTGGCATCTCGA GATGGACACCCGCCTTGAGCATGACGTCATCATATTTGCCGACAGCCAGCAACAATATAAATTTGGAGTC CGTTTACCCTTACGCAACCAGGCTGGCATGAGCGACAGCGGTACCGAAAGCGTCTGGGGGCTGAGCACGC AGCATCAGGTCGTCACGCAACAGGTTTCCACCCGCGATTACAACTACCGGGAAGCATTAAGTCCGATGGA CACCACTGCCAGTGCGGCAGGAGGTGATGAAACTACCACTGGCGAAGTCTATCAGTACGCGGAGCCTTTT CTGCAATCCGGATCCGAAGACGGGGTTGAAACCGGTGCATTTTATGCCCGCCTGCGTCATGAACGCATAA TGAATGCTCAGAAGACCGTCACCGGCCACAGCAGTTGCCCTCATCTGGCACCGGGTCAGGTGCTGGAAGT CGATGGCACACTTCCTTCTGTGTTAAATGAAGGCATCCTGCTGACGGGGATAAAAACCTACGGTTCACGC AAAAGTCGTTTTACCGCACAATTGACCGGTCAGCCTTACAGTGAAACCCTCTGCTTCCGCCCTGTTCTGC CAGAGCGCCCGGTAATCGCCGGTACCCTTCCTGCCCGGGTTGAAAGCACCACCAAAGGCGATATCTATTC CTGGCTGGATAATCAGGGCAGATACCGCGTGAAGCTCGATTTTGACCGCGACGAACAGGAACAGGGCTAT GCCTGTCTCTGGTTGCGTATGGCAAAACCTTACGCCGGTGATACCTACGGCTGGCACGCGCCTTTACTCG ATGGCACTGAAGTCGCCATCGCTTTCGATTCCGGCGACTGTGACCGGCCTTATATCGCGTATGCCCTGCA TGATTCAGCACACAGTGACCATGTCACCGACGACAACCATACGCGCAATGTCCTGCGTACTCCGTCTTTC AACAAGCTGCGGATGGAAGACAAACGCTCAGAGGAACACATCAAGCTTGCGACCGAGTTTGGCAAAACGC AGCTGAACATGGGGCATCTGGTGGATGCGGAACGCGCACAGCGCGGTGCCGGTTTTGAAATCAGGACGGA TGAACACGGCGTGATGCGCGCGGGCAAAGGGATATTTGTCAGTGCAGAAGAACAACTCAAGGCGCAGGGA AAAGTGCTGGATATGGATCCGGCCCTCGGTCAAATCCATCAGGCCAACAATGAGATGCAGGCTCTGAGTG ATGCCGCCATGCAGGCTACCGCGCTGGCATCAGATATTCAAAAGCAGCTCAGCTTTGTCGATAACCGCCT GACGCAGTTGCAGTCCGCGGCCATTTTAGCCAGCGCCCCGATGGGCGTGGCGCTTACCAGCGGTGAGCAT TTACAGCTGGCAGCCCGACAGAATCTGATGGTGAACGCCGGTAACAATGCCGACGTTGGCGTCATGAAAA ACCTGTTCATCGGCGCAGGTGAAGCGTTAAGCATGTTTGTACATAAGCAGGATGCCACGCTGATTGCCAA TCAGGGACAGGTCACTATCCAGGCGCAAAACAACGCCATGTCCCTGACCGCAAGACAAACCCTGACCATC ACCAGCTCGGACGATGAAATCATCATTACCACTCCGAAAAAACTGACCCTCAACGGCGGCGGCTCTTATC TGACGCTGGAGGCAAGTAAAATCGAGCACGGGTCTTCCGGCGATATGACGATTAAGTGCACGAACTACCT GGTGCCGATGGTGGGGGCTTCAAAACCAAGCGATACACCTAAATTTCCTATTGTCACGATGGAAAACTTG ACTGAAGAGAATGGGAAGGATTTTTCTGGATAA |
| Protein ID: 322835264 |
| SecReT6 ID | 422 |
| T6SS type | i2 |
| Gene symbol | - |
| Locus tag | Rahaq_4582 |
| Strain | Rahnella sp. Y9602 |
| Replicon | plasmid pRAHAQ01 [GenBank: NC_015062] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 150223..152745 [+] |
| Product | Rhs element Vgr protein |
| Note | TssI |
| UniProt ID | E8Y0Z7 |
| KEGG ID | rah:Rahaq_4582 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 5.60E-56, Aligned region: 37..345 DUF2345 [PF10106], Evalue: 7.10E-34, Aligned region: 607..734 T6SS_Vgr [PF13296], Evalue: 2.20E-31, Aligned region: 477..580 T6SS_Vgr [PF13296], Evalue: 2.20E-31, Aligned region: 614..638 Phage_base_V [PF04717], Evalue: 8.30E-15, Aligned region: 391..472 |
| Protein Sequence: 840 a.a. [Download] |
| >gi|322835264|ref|YP_004215290.1| Rhs element Vgr protein [Rahnella sp. Y9602] MVDILKNLLPDATGLSRYSLDIWNSPYSLDVLNFRGEEQLSETFSYTVDVTCPEPDIGAAQMLRQFASFT MGTPFQPERAVYGVIRDFQRLSTSADETLYRLELVPRLRLLENSTNSFIFQNQSVPEVAEFILRKHGLEG QDFEFRLSHTYPDRELITQWGETDLQFIKRILAEVGIWFRFEADTRLTCEKVLFGDGPEQYQFGVTLPYC EPSGMRDGHAESVWGLKIHWNAVTGKIFKRDYNYREATTPLDVSAQVRSAAPVTGESYLYARPYREAGED VDAAAETGAFYARIRHERKLNHQCRIFARTTGSGLAPGQVLEPQAYPFSDLPDGILITRIVAKGSRTEHF RLNIWGMAYRETIGFRPEPPARPVLSGTIPARVESPTRGDTYAWLDNQGRYRVRIDGDRASADAGYAYLW VRLAKPYGGDGYGWHMPLTDGTEVAIAFDGGDPDRPYIAAALHDSEHPDHVTERNHTRNVLRTPSNNKLR MEDRRGEEHIKLATEYGKTQLNSGHIVDAQNAPRGEGFELRTDEHGVLRGGKGVFLSADAQPQGQVLDNS AAMAEIEYLQGQVKALSLAAAEASALEADIAAQIAMFSERLKPINQVVLASAPQGIALTSGEHLQLAAAK NMILNAGNNADIGVIKNLTVNTGEEMGIFALKGEMSLKAGEGRVDVQAQNNRLALAAGKKVSLTAVDGDI LFSAKKRITLIGGGSYLILQDGKIEYGTAGEYFRKTPHTVLTVANPVRLKMPYLPGGGKFDLALDFRDED SNAIANADYRIIFESGSVLAGKLDEQGYALHKNVPFESASVEYVLPEPLPDPDWERYTSLDAATDSLLTK |
| Nucleotide Sequence: 2523 bp [Download] |
| >gi|322835126|ref|NC_015062.1|:150223-152745 Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence GTGGTTGATATCCTGAAAAATCTTCTCCCTGATGCGACAGGTCTGTCCCGCTACTCACTTGATATCTGGA ACAGCCCTTACAGTCTGGACGTGCTGAACTTTCGCGGCGAGGAACAGCTCAGCGAGACTTTTTCCTACAC CGTTGACGTCACCTGCCCCGAACCGGATATCGGTGCCGCGCAGATGCTGCGCCAGTTCGCCAGCTTCACG ATGGGCACGCCTTTCCAGCCTGAACGCGCCGTGTACGGCGTTATCCGTGACTTTCAGCGCCTGTCCACCT CCGCCGACGAAACCCTGTACCGCCTTGAGCTGGTGCCGCGCCTGCGGCTGCTGGAAAACAGCACCAACAG CTTTATTTTTCAGAACCAGTCGGTGCCCGAGGTGGCAGAGTTTATCCTGCGCAAACACGGGCTCGAGGGG CAGGATTTTGAGTTTCGCCTCAGCCACACCTACCCCGACCGCGAACTCATCACCCAGTGGGGCGAGACCG ACCTGCAGTTTATTAAACGCATTCTGGCCGAGGTCGGTATCTGGTTCCGCTTTGAGGCGGACACCCGCCT GACGTGTGAAAAGGTGCTGTTCGGCGACGGGCCGGAGCAGTACCAGTTTGGCGTGACCCTGCCGTACTGC GAGCCGTCGGGGATGCGCGACGGCCACGCCGAAAGCGTCTGGGGGCTGAAAATCCACTGGAACGCCGTCA CCGGCAAAATCTTCAAACGCGATTACAACTACCGCGAGGCGACCACGCCGCTGGACGTCAGCGCGCAGGT GCGCAGCGCCGCGCCGGTGACCGGCGAAAGCTACCTGTACGCTCGCCCTTACCGCGAGGCCGGTGAGGAC GTGGACGCCGCCGCCGAAACCGGCGCGTTCTACGCCCGCATCCGCCATGAACGTAAACTCAATCATCAGT GCCGGATATTCGCCCGCACCACCGGCAGCGGGCTGGCGCCGGGTCAGGTGCTGGAGCCGCAGGCCTATCC GTTCAGCGACCTGCCGGACGGCATCCTCATTACCCGCATCGTCGCCAAAGGCTCACGCACCGAACATTTT CGCCTCAATATCTGGGGGATGGCCTACCGCGAAACGATTGGCTTCCGCCCCGAACCACCGGCGCGGCCGG TGCTCAGCGGCACGATACCGGCGCGGGTGGAAAGCCCGACCCGAGGCGACACCTACGCGTGGCTGGATAA TCAGGGGCGCTACCGCGTGCGCATTGACGGCGACCGTGCGTCGGCGGATGCCGGTTACGCGTACCTGTGG GTGCGCCTCGCCAAACCCTACGGCGGCGACGGCTACGGCTGGCATATGCCGCTGACCGACGGCACAGAAG TGGCCATCGCCTTTGACGGCGGCGACCCCGACCGGCCGTATATCGCCGCCGCGCTGCACGACTCCGAACA TCCCGACCATGTGACCGAACGGAACCACACCCGCAACGTTCTGCGCACCCCGTCAAATAACAAGCTGCGG ATGGAGGACCGGCGCGGTGAGGAGCACATCAAACTCGCCACCGAATACGGCAAAACCCAGCTGAATAGCG GGCATATCGTCGATGCGCAAAACGCACCGCGCGGCGAAGGTTTTGAGCTGCGCACCGATGAACACGGCGT CCTGCGCGGCGGTAAGGGCGTCTTTCTCAGCGCGGACGCACAGCCGCAGGGTCAGGTGCTGGATAACAGC GCGGCGATGGCTGAAATCGAATACCTGCAGGGTCAGGTGAAAGCCCTCAGCCTGGCCGCCGCCGAAGCCA GCGCGCTGGAGGCCGATATCGCGGCGCAAATCGCCATGTTCAGCGAACGGCTGAAGCCGATAAATCAGGT GGTGCTGGCCAGCGCGCCACAAGGGATTGCGCTGACCAGCGGCGAGCATCTGCAACTGGCCGCCGCCAAA AACATGATACTGAACGCCGGTAACAATGCGGATATCGGGGTGATTAAGAACCTGACCGTCAACACTGGTG AGGAAATGGGCATCTTTGCGCTGAAGGGCGAAATGAGCCTGAAGGCCGGCGAAGGCAGGGTCGACGTTCA GGCGCAGAACAACCGGCTGGCGCTTGCGGCGGGCAAAAAAGTGAGCCTCACGGCGGTGGACGGCGACATC CTGTTCAGCGCGAAAAAGCGCATCACGCTGATAGGCGGCGGCAGTTATCTCATCCTGCAGGACGGCAAAA TTGAGTACGGCACGGCCGGTGAATATTTCAGGAAAACGCCGCATACGGTGCTGACGGTGGCGAACCCTGT GCGACTGAAAATGCCCTATCTTCCGGGGGGCGGGAAGTTCGACCTGGCGCTGGATTTCAGGGATGAAGAC TCAAATGCCATAGCCAACGCGGATTACCGCATCATATTCGAAAGCGGTTCGGTACTGGCTGGCAAGCTTG ATGAACAGGGATATGCATTGCATAAAAATGTGCCGTTTGAATCAGCCAGTGTGGAATACGTTTTGCCCGA ACCCTTACCGGATCCGGACTGGGAACGCTACACCTCACTTGATGCGGCAACGGACAGCCTTTTAACGAAA TAA |