| Protein ID: 402568944 |
 SecReT6 ID | 689 |
| T6SS type | i3 |
| Gene symbol | - |
| Locus tag | GEM_4204 |
| Strain | Burkholderia cepacia GG4 |
| Replicon | chromosome II [GenBank: NC_018514] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 1125368..1128034 [-] |
| Product | ATP-dependent Clp protease, ATP-binding subunit ClpB |
| Note | TssH |
| UniProt ID | J7JE00 |
| KEGG ID | bct:GEM_4204 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | AAA_2 [PF07724], Evalue: 8.70E-38, Aligned region: 228..248 AAA_2 [PF07724], Evalue: 8.70E-38, Aligned region: 616..782 AAA [PF00004], Evalue: 3.40E-18, Aligned region: 230..330 AAA [PF00004], Evalue: 3.40E-18, Aligned region: 621..705 ClpB_D2-small [PF10431], Evalue: 9.20E-12, Aligned region: 788..862 AAA_5 [PF07728], Evalue: 1.10E-11, Aligned region: 230..250 AAA_5 [PF07728], Evalue: 1.10E-11, Aligned region: 620..719 AAA_16 [PF13191], Evalue: 7.10E-10, Aligned region: 33..78 AAA_16 [PF13191], Evalue: 7.10E-10, Aligned region: 207..285 AAA_16 [PF13191], Evalue: 7.10E-10, Aligned region: 491..539 AAA_16 [PF13191], Evalue: 7.10E-10, Aligned region: 613..662 AAA_16 [PF13191], Evalue: 7.10E-10, Aligned region: 685..704 AAA_22 [PF13401], Evalue: 8.90E-09, Aligned region: 230..310 AAA_22 [PF13401], Evalue: 8.90E-09, Aligned region: 370..399 AAA_22 [PF13401], Evalue: 8.90E-09, Aligned region: 617..657 Sigma54_activat [PF00158], Evalue: 8.20E-07, Aligned region: 225..246 Sigma54_activat [PF00158], Evalue: 8.20E-07, Aligned region: 603..734 IstB_IS21 [PF01695], Evalue: 4.40E-06, Aligned region: 214..249 IstB_IS21 [PF01695], Evalue: 4.40E-06, Aligned region: 617..639 Zeta_toxin [PF06414], Evalue: 3.70E-05, Aligned region: 230..250 Zeta_toxin [PF06414], Evalue: 3.70E-05, Aligned region: 618..660 Clp_N [PF02861], Evalue: 7.00E-05, Aligned region: 29..75 Clp_N [PF02861], Evalue: 7.00E-05, Aligned region: 117..129 AAA_25 [PF13481], Evalue: 7.50E-05, Aligned region: 229..254 AAA_25 [PF13481], Evalue: 7.50E-05, Aligned region: 286..321 AAA_25 [PF13481], Evalue: 7.50E-05, Aligned region: 521..548 AAA_25 [PF13481], Evalue: 7.50E-05, Aligned region: 605..642 AAA_17 [PF13207], Evalue: 0.00015, Aligned region: 231..247 AAA_17 [PF13207], Evalue: 0.00015, Aligned region: 388..400 AAA_17 [PF13207], Evalue: 0.00015, Aligned region: 619..656 NACHT [PF05729], Evalue: 0.00017, Aligned region: 230..265 NACHT [PF05729], Evalue: 0.00017, Aligned region: 620..648 FtsK_SpoIIIE [PF01580], Evalue: 0.00037, Aligned region: 223..272 FtsK_SpoIIIE [PF01580], Evalue: 0.00037, Aligned region: 435..519 FtsK_SpoIIIE [PF01580], Evalue: 0.00037, Aligned region: 611..637 AAA_29 [PF13555], Evalue: 0.00055, Aligned region: 222..242 AAA_29 [PF13555], Evalue: 0.00055, Aligned region: 463..474 AAA_29 [PF13555], Evalue: 0.00055, Aligned region: 615..645 AAA_14 [PF13173], Evalue: 0.0017, Aligned region: 290..310 AAA_14 [PF13173], Evalue: 0.0017, Aligned region: 618..702 AAA_18 [PF13238], Evalue: 0.003, Aligned region: 231..250 AAA_18 [PF13238], Evalue: 0.003, Aligned region: 621..649 ResIII [PF04851], Evalue: 0.0037, Aligned region: 216..251 ResIII [PF04851], Evalue: 0.0037, Aligned region: 290..311 ResIII [PF04851], Evalue: 0.0037, Aligned region: 592..642 Hpr_kinase_C [PF07475], Evalue: 0.0044, Aligned region: 178..222 Hpr_kinase_C [PF07475], Evalue: 0.0044, Aligned region: 230..243 Hpr_kinase_C [PF07475], Evalue: 0.0044, Aligned region: 621..637 Arch_ATPase [PF01637], Evalue: 0.0053, Aligned region: 208..244 Arch_ATPase [PF01637], Evalue: 0.0053, Aligned region: 295..313 Arch_ATPase [PF01637], Evalue: 0.0053, Aligned region: 618..634 T2SE [PF00437], Evalue: 0.0077, Aligned region: 215..244 T2SE [PF00437], Evalue: 0.0077, Aligned region: 591..698 AAA_19 [PF13245], Evalue: 0.0091, Aligned region: 227..252 AAA_19 [PF13245], Evalue: 0.0091, Aligned region: 616..642 AAA_19 [PF13245], Evalue: 0.0091, Aligned region: 851..869 |
| Protein Sequence: 888 a.a. [Download] |
| >gi|402568944|ref|YP_006618288.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia cepacia GG4] MSDIGRVNLFGKLNPLLYETLEQATGFCRLRGNPYVELAHWFKQILQRPDGDLQRVLHRFGIDEAAIERG LVAALDRLPRGAGSVSDLSAHIDDAVERAWVYATLKYDATRIRGAVLLLAILKTPQLRNVLYAIAREFEH IVPDVLADELEAIVDGSAEAQPAANADAGAGSGDAAMRGAAAVKGSALARFAVDLTARARAGEIDPVVGR DAEIRQILDILLRRRQNNPLLVGEAGVGKTAVAEGFALRIAAGDVPPSLRDVALYLLDIGLLQAGASVKG EFESRLRGVIDEAMSSERPAILFVDEVHTLVGAGGAAGTGDAANLLKPALARGLLRTIGATTWSEYKQYI EKDPALTRRFQLVHVLEPDEAAAVTMLRGLAAKLEAHHRVLVLDDALHAAVTLSHRYIPARQLPDKAISL LDTACSRVAVSQHAVPAPIEDARRRIDGLRVERERIGRECALGSGDSTRRDAIDAEVAATQAELDRLDTR WQTERDALTSIVESRAALLDDEPTHERSAGARADLQARLAAAHQALADLQGDAPLVLPAVDTHAVAAVVA DWTGIPLGRMVRDETQAVLKLAETLGERVVGQRHAVELVAERIQTARAKLDDPTKPHGVFLLCGPSGVGK TETALALADTLYGGERNAITINMSEFQEAHTVSTLKGAPPGYVGYGQGGVLTEAVRRRPYSVVLLDEIEK AHRDVHEIFLQVFDKGWMEDGEGRDIDFRHTVILLTSNVGADCVMQLCRDPERLPDVQTLADALRAPLLE VFPAALLGRLTVVPYYPLTDATLARIVELQLRRFEKRIDLHHGIRLRCTDAATALIVERCRTIESGGRMV DAILTHTVMPRIGRAILEATLEGRALAAIEVSAAGGEFAYRFDEESTT |
| Nucleotide Sequence: 2667 bp [Download] |
| >gi|402567932|ref|NC_018514.1|:c1128034-1125368 Burkholderia cepacia GG4 chromosome 2, complete sequence ATGTCCGATATCGGCCGCGTCAACCTGTTCGGAAAACTGAATCCGCTCCTCTACGAGACACTCGAGCAGG CGACCGGATTCTGCCGGCTGCGCGGTAATCCGTACGTCGAACTCGCGCACTGGTTCAAGCAGATCCTGCA GCGGCCCGATGGCGACCTGCAGCGCGTGCTGCACCGTTTCGGGATCGACGAGGCCGCCATCGAGCGCGGG CTCGTCGCCGCGCTCGACCGGCTGCCGCGCGGCGCGGGATCGGTGTCGGACCTGTCCGCGCACATCGATG ACGCGGTCGAGCGCGCGTGGGTCTATGCCACCTTGAAATACGACGCGACACGGATTCGCGGCGCGGTCCT GCTGCTCGCGATCCTGAAGACGCCGCAACTGCGCAACGTGCTGTATGCGATCGCGCGCGAGTTCGAGCAC ATCGTGCCCGACGTGCTGGCCGACGAACTCGAAGCGATCGTCGACGGGTCAGCCGAGGCGCAACCGGCCG CGAACGCTGATGCGGGCGCCGGCTCAGGCGACGCCGCGATGCGCGGTGCGGCGGCCGTGAAAGGCTCGGC TCTGGCGCGCTTTGCCGTCGACCTGACCGCCCGCGCGCGGGCTGGCGAAATCGATCCCGTCGTCGGGCGC GACGCCGAGATTCGCCAGATCCTCGACATCCTGCTGCGGCGCCGGCAGAACAACCCGCTGCTGGTCGGTG AGGCCGGCGTCGGCAAGACAGCCGTCGCGGAAGGCTTCGCGTTGCGGATCGCCGCCGGCGACGTGCCGCC GTCGCTGCGCGACGTCGCGCTGTACCTGCTCGACATCGGGCTGCTGCAGGCCGGCGCGAGCGTGAAGGGC GAGTTCGAGAGCCGGCTGCGCGGCGTGATCGACGAAGCGATGTCGTCCGAGCGGCCGGCGATCCTGTTCG TCGACGAAGTGCATACGCTCGTCGGCGCGGGCGGGGCGGCCGGCACCGGCGACGCCGCGAACCTGCTGAA ACCCGCGCTCGCGCGCGGCCTGCTGCGCACGATCGGCGCGACCACCTGGTCTGAGTACAAGCAGTACATC GAAAAGGACCCCGCGCTGACCCGGCGCTTCCAGCTCGTGCACGTGCTCGAGCCCGACGAGGCCGCCGCGG TGACGATGCTGCGCGGCCTGGCCGCGAAGCTCGAGGCCCACCACCGCGTGCTGGTGCTCGACGACGCGCT GCATGCCGCGGTGACGCTGTCGCACCGGTATATCCCCGCGAGGCAGCTGCCGGACAAGGCGATCAGCCTG CTCGACACCGCCTGCTCGCGCGTCGCCGTCAGCCAGCACGCGGTGCCTGCGCCGATCGAGGACGCGCGCC GACGCATCGACGGCCTGCGGGTCGAGCGCGAACGGATCGGGCGCGAGTGTGCGCTCGGCAGCGGCGACAG CACGCGGCGCGACGCGATCGATGCCGAGGTTGCCGCCACGCAGGCGGAACTCGACCGGCTCGACACGCGC TGGCAGACCGAGCGCGACGCGTTGACCTCGATCGTCGAATCGCGCGCCGCGCTGCTCGACGACGAACCGA CGCACGAACGCTCCGCCGGCGCGCGCGCCGACCTGCAGGCGCGCCTGGCCGCCGCGCATCAGGCACTGGC CGACCTGCAGGGCGACGCACCGCTCGTGCTGCCCGCCGTCGACACGCATGCGGTCGCGGCCGTCGTCGCC GACTGGACCGGCATCCCGCTCGGCCGGATGGTGCGCGACGAAACGCAGGCCGTGCTGAAGCTCGCAGAGA CGCTCGGCGAACGCGTCGTCGGCCAGCGACATGCGGTCGAGCTAGTCGCCGAACGCATCCAGACCGCGCG CGCGAAGCTCGACGACCCGACCAAGCCGCACGGCGTGTTCCTGCTGTGCGGGCCGTCCGGCGTCGGCAAG ACCGAGACCGCGCTGGCGCTGGCCGACACGCTGTACGGCGGCGAGCGCAACGCGATCACGATCAACATGA GCGAGTTCCAGGAGGCGCACACGGTATCGACGCTGAAGGGTGCGCCGCCCGGCTATGTCGGCTACGGACA GGGCGGGGTGCTCACCGAGGCCGTGCGGCGTCGGCCGTACAGCGTCGTGCTGCTCGACGAGATCGAGAAG GCGCACCGCGACGTGCACGAGATTTTCTTACAGGTGTTCGACAAGGGCTGGATGGAAGATGGCGAAGGGC GCGACATCGACTTCCGGCATACCGTGATCCTGCTGACCTCGAACGTCGGCGCCGATTGCGTGATGCAGCT GTGCCGCGACCCCGAGCGTCTGCCTGACGTGCAGACGCTCGCCGATGCGCTGCGCGCGCCGCTGCTCGAG GTGTTCCCGGCCGCGCTGCTCGGCCGGCTGACTGTCGTGCCGTACTACCCGCTGACCGATGCGACGCTCG CGCGCATCGTCGAACTGCAGTTGCGGCGCTTCGAGAAACGGATCGACCTGCATCACGGTATCCGGCTGCG CTGCACCGACGCGGCGACCGCGCTGATCGTCGAGCGCTGCCGGACGATCGAATCCGGCGGCCGCATGGTC GACGCAATCCTCACGCATACCGTGATGCCGCGGATCGGCCGCGCGATCCTCGAGGCCACGCTCGAAGGTC GCGCACTGGCGGCAATCGAGGTGAGTGCGGCCGGCGGCGAATTCGCTTACCGGTTCGACGAGGAGAGCAC GACGTGA |