SecReT6
Protein ID: 446541787
SecReT6 ID790
T6SS typei1
Gene symbolclpB-2
Locus tagVCV52_A0133
StrainVibrio cholerae V52
Repliconchromosome [GenBank: NZ_AAKJ02000013] [Browse all T6SS(s) in this replicon]
Location [Strand]24744..27353 [-]
ProductATPase AAA
NoteTssH
UniProt IDNA
KEGG IDNA
PDB IDNA
Domain hit(s) vs Pfam AAA_2 [PF07724], Evalue: 2.30E-38, Aligned region: 221..241
AAA_2 [PF07724], Evalue: 2.30E-38, Aligned region: 607..768
AAA [PF00004], Evalue: 4.10E-20, Aligned region: 221..352
AAA [PF00004], Evalue: 4.10E-20, Aligned region: 613..730
AAA [PF00004], Evalue: 4.10E-20, Aligned region: 777..821
ClpB_D2-small [PF10431], Evalue: 4.20E-14, Aligned region: 774..848
AAA_5 [PF07728], Evalue: 4.50E-13, Aligned region: 221..244
AAA_5 [PF07728], Evalue: 4.50E-13, Aligned region: 612..731
AAA_16 [PF13191], Evalue: 8.40E-10, Aligned region: 76..112
AAA_16 [PF13191], Evalue: 8.40E-10, Aligned region: 200..236
AAA_16 [PF13191], Evalue: 8.40E-10, Aligned region: 258..299
AAA_16 [PF13191], Evalue: 8.40E-10, Aligned region: 583..653
AAA_22 [PF13401], Evalue: 1.80E-09, Aligned region: 220..313
AAA_22 [PF13401], Evalue: 1.80E-09, Aligned region: 516..547
AAA_22 [PF13401], Evalue: 1.80E-09, Aligned region: 609..636
AAA_25 [PF13481], Evalue: 9.40E-08, Aligned region: 221..262
AAA_25 [PF13481], Evalue: 9.40E-08, Aligned region: 607..645
Clp_N [PF02861], Evalue: 1.80E-06, Aligned region: 24..72
AAA_14 [PF13173], Evalue: 6.30E-06, Aligned region: 221..322
AAA_14 [PF13173], Evalue: 6.30E-06, Aligned region: 490..535
AAA_14 [PF13173], Evalue: 6.30E-06, Aligned region: 611..694
Arch_ATPase [PF01637], Evalue: 9.00E-06, Aligned region: 132..160
Arch_ATPase [PF01637], Evalue: 9.00E-06, Aligned region: 201..241
Arch_ATPase [PF01637], Evalue: 9.00E-06, Aligned region: 612..652
NACHT [PF05729], Evalue: 6.80E-05, Aligned region: 221..250
NACHT [PF05729], Evalue: 6.80E-05, Aligned region: 370..447
NACHT [PF05729], Evalue: 6.80E-05, Aligned region: 613..641
DUF258 [PF03193], Evalue: 9.70E-05, Aligned region: 193..238
DUF258 [PF03193], Evalue: 9.70E-05, Aligned region: 612..653
AAA_29 [PF13555], Evalue: 0.00029, Aligned region: 213..238
AAA_29 [PF13555], Evalue: 0.00029, Aligned region: 608..623
AAA_19 [PF13245], Evalue: 0.00031, Aligned region: 218..242
AAA_19 [PF13245], Evalue: 0.00031, Aligned region: 609..634
IstB_IS21 [PF01695], Evalue: 0.00044, Aligned region: 215..342
IstB_IS21 [PF01695], Evalue: 0.00044, Aligned region: 611..630
AAA_17 [PF13207], Evalue: 0.00058, Aligned region: 221..260
AAA_17 [PF13207], Evalue: 0.00058, Aligned region: 613..647
AAA_18 [PF13238], Evalue: 0.00087, Aligned region: 221..288
AAA_18 [PF13238], Evalue: 0.00087, Aligned region: 312..383
AAA_18 [PF13238], Evalue: 0.00087, Aligned region: 467..510
AAA_18 [PF13238], Evalue: 0.00087, Aligned region: 613..657
Sigma54_activat [PF00158], Evalue: 0.00096, Aligned region: 219..237
Sigma54_activat [PF00158], Evalue: 0.00096, Aligned region: 610..710
DUF815 [PF05673], Evalue: 0.0015, Aligned region: 217..296
DUF815 [PF05673], Evalue: 0.0015, Aligned region: 565..646
RNA_helicase [PF00910], Evalue: 0.0027, Aligned region: 222..242
RNA_helicase [PF00910], Evalue: 0.0027, Aligned region: 613..635
MobB [PF03205], Evalue: 0.0049, Aligned region: 221..242
MobB [PF03205], Evalue: 0.0049, Aligned region: 612..634
SRP54 [PF00448], Evalue: 0.0072, Aligned region: 221..265
SRP54 [PF00448], Evalue: 0.0072, Aligned region: 612..633
Zeta_toxin [PF06414], Evalue: 0.0095, Aligned region: 221..238
Zeta_toxin [PF06414], Evalue: 0.0095, Aligned region: 595..652
Protein Sequence: 869 a.a.     [Download]
>gi|446541787|ref|WP_000619133.1| ATPase AAA [Vibrio cholerae V52]
MIRIELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEHYLDVLLDNPLSDVRLVLKQAGLEVDQVKQA
IASTYSREQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSFKLISLFEGIN
RENLKKHFAMILSDSAETTVAKTEKNAANPLQAAAETPLGRFCTNVTEQARNGELDPVLSRENELNLMVD
ILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGV
IDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRR
FQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIA
INMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQKSLV
ESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAERLMHPQVDADQIAEVIADWTGVPVD
QMNTDELHKITHLTSILGQAIKGQESAIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLA
EQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNI
FYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAFFKPALLARMEVIP
YLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPPVSL
ALLNKLAERAPVERIRLAAEAGEFIGEVA
 
Nucleotide Sequence: 2610 bp     [Download]
>gi|121726954|gb|NZ_AAKJ02000013|VCV52_A0133|clpB-2|:24744-27353
GTGATCCGTATTGAATTACCCACTCTTATTGCAAAACTGAATGCACAAAGCAAATTGGCTCTGGAGCAAG
CGGCCTCTCTCTGTATTGAGCGCCAACACCCTGAAGTCACTCTAGAACATTATCTGGATGTGTTGCTGGA
TAATCCCCTCTCTGATGTGCGTCTCGTACTCAAGCAAGCGGGGCTGGAAGTCGATCAGGTGAAACAGGCC
ATCGCATCAACCTATAGCCGTGAACAGGTCTTGGATACCTATCCAGCGTTTTCGCCACTGCTGGTCGAGT
TACTGCAAGAAGCTTGGCTGCTTTCCAGTACCGAGTTAGAGCAGGCTGAGCTGCGTTCAGGGGCGATTTT
CTTAGCCGCGCTGACCCGTGCGGACCGTTATCTATCGTTCAAATTGATCAGTTTGTTTGAAGGCATCAAC
CGCGAAAACCTTAAAAAACACTTTGCGATGATCTTAAGTGATTCTGCAGAAACCACAGTGGCTAAAACAG
AGAAAAACGCGGCCAATCCACTGCAAGCCGCCGCAGAAACACCACTCGGACGCTTTTGCACGAATGTGAC
TGAGCAAGCCCGTAACGGTGAGCTTGATCCTGTCCTGAGCCGTGAAAACGAACTCAACTTGATGGTGGAT
ATTCTGTGCCGTCGCCGCAAAAACAACCCGATTGTGGTGGGTGAAGCAGGTGTTGGTAAAAGTGCCATGA
TTGAAGGTTTGGCGCTGCGTGTAGTGGCTGGCAAAGTGCCCACCCAACTGCAAAATGTAGAACTCTATTC
GTTGGATCTTGGTCGCTTGCAAGCGGGTGCATCGGTGAAAGGCGAGTTTGAAAAGCGCCTAAAAGGGGTG
ATTGATGCGATTAAGCAATCGCCTAAACCGATCATTTTATTCATCGATGAAGCGCACACCTTAATTGGTT
CTGGTAACCAAGAAGGGGGCAGTGATGCGGCAAACTTGCTCAAGCCTGCGCTGGCGCGTGGTGAGTTAAG
CACAGTGGCGGCGACGACGTGGAAAGAGTACAAAAAGTATTTTGAAAAAGATCCCGCGCTGACGCGCCGT
TTCCAACTGGTCAAACTCGATGAACCAACGATCGATCAAGCCGTCGATATTCTGCGCGGTCTTAACAGTG
TCTATGAAAAGGCACACAACGTACTCATCACTGATGATGCACTAAAAGCTGCCGCTGAACTGTCAGCGCG
TTACATCTCAGGTCGTCAACTGCCCGATAAAGCGATTGATGTGCTGGATACCGCTTGTGCGCGGATTGCG
ATCAATATGACCACGCCACCTAAGCGTTTAGCGCTACTTGAAACCTTGTGCCATCAGCGTCAACTCGAAA
TTGACATGCTAGAGCGGGCGCAATTCCTTGGCCAAGAGGTCGATAGCGAGCGCCTTGATGTTCTGCGTAA
TCAAGAGTTGGCCGATGAAGCGGAAAAAGCCGCGTTGACACAGAGTTGGCAGCAGCAAAAAAGCTTGGTG
GAGTCGATCATCGCACTGCGTGCTGAGCTGATGGAGTTAAGCCAAGCGCAAGAGCAAGATCCCGACCATT
TATTGGTGGTGCGTACGGCGCTGCAAGAGCAGTATCAAGCACTCGATGCGATTGATCATGCTGAGCGTTT
GATGCACCCGCAAGTCGATGCGGATCAGATTGCTGAAGTGATCGCCGATTGGACGGGCGTGCCTGTCGAT
CAGATGAACACCGATGAGCTGCATAAAATCACCCATTTGACCTCGATTTTAGGTCAAGCGATCAAAGGTC
AAGAATCGGCCATCGAACGTATCCATCGTCATTTACTGACAGCGCGTGCCGATCTGCGTCGTCCGGGACG
TCCGAAAGGGGCATTCCTGCTGGTAGGGCCAAGCGGTGTAGGTAAAACCGAAACCGTAGTGCAACTGGCA
GAGCAGCTTTACGGTGGTAAACAGTTCCTCACCACCATCAACATGTCGGAATACCAAGAGAAACACACCG
TTTCCCGCCTGATTGGTTCACCTCCGGGTTATGTTGGCTACGGTGAAGGCGGTGTGCTGACGGAGGCAAT
CCGTAAGATGCCTTATTCGGTGGTTCTGCTTGATGAAGTCGAAAAAGCCCATCCAGAAGTTTTAAATATC
TTCTACCAAGGCTTTGATAAAGGCGAAATCGCCGATGGTGAAGGTCGTGTCATCGACTGCCAAAACATTG
TGTTCTTCCTGACATCGAACTTAGGCTACCAAACCATAGTCGATTATGCCGATGAGCCCGCCAAGCTTGA
TGAAGCGCTTTATCCTGAATTGGCCGCTTTCTTTAAACCTGCTCTGCTGGCGCGTATGGAAGTGATCCCT
TACCTACCACTGGGTAAAGAAGTGTTGGCACAGATTGTTCGCGGCAAGCTGGCTCGTCTCGAGAAACTGT
TCAAGACACGTTACAACGCAGAAGTGGTGATTGAAGAGAGCTTAATTGACGAAATCTTAAGCCGTGCGAC
ACGCAGCGAAAACGGTGCGCGTATGCTGGAGGCGATCATTGAAGGGCAATTGCTGCCACCCGTTTCATTG
GCGCTGCTGAATAAACTCGCCGAGAGAGCGCCCGTTGAGCGCATTCGTTTAGCGGCAGAAGCGGGTGAAT
TTATCGGAGAGGTAGCGTAA