| Protein ID: 538392466 |
 SecReT6 ID | 845 |
| T6SS type | i3 |
| Gene symbol | - |
| Locus tag | VAPA_1c02360 |
| Strain | Variovorax paradoxus B4 |
| Replicon | chromosome I [GenBank: NC_022247] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 246754..249138 [+] |
| Product | type VI secretion system Vgr family protein |
| Note | TssI |
| UniProt ID | T1X4J5 |
| KEGG ID | vpd:VAPA_1c02360 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 4.30E-90, Aligned region: 25..328 Phage_base_V [PF04717], Evalue: 1.80E-24, Aligned region: 365..457 |
| Protein Sequence: 794 a.a. [Download] |
| >gi|538392466|ref|YP_008514039.1| type VI secretion system Vgr family protein [Variovorax paradoxus B4] MPNRVVKAHTPLGEDQLLFRSMHGTEGLSQLFEFEVDLLSPSVSLDMKSVLGKPLSLEIQTAGEPRFLNG QIVRFTMVGKEGGSSRYVLYRATVRPWLWYLTRTSDCKIFQNKSVVDILQEVFADYNFAFEKKLSGTYRQ WEYCVQYQETDFAFVSRLMEHEGIYYYFKHEKGEHTLVLADDIGAHETLPGYPKISYLAADRNPDPFQEV IDQWQVTEEIRPGTYVVDDYDFKKSKADLMGMRSQPRGNPHDTYEIYEWLGGFSEAEQGEHYSRIRLEEA QSQAERDVGHSSVRGMAPGYRFTMQNCPRQDDNREYLIVSVSYALREGGYESGAAESHYSFSFAVQPTSY AFRPPRVTPMTRTNGPQTATVVGRAGQEYWVDQYGRVKVQFRWDRYGKSDENSSCWVRVSSAWAGSNYGA VNHPRKGQEVIVDFIGGHPDRPIIIGRVYNSDQMPPLELPAKVTVSGFVSRSQDGTPANANEFILDDAPG CELVRIHAEKDFELDVEADERDTIAGDRTTVIEGADDYTTNTSLTETINGPHTVTVNEGGPQNITVNGGP QNVKIKGGNQDVYVDGDQIIHVTGSRTDTVDSGETRTITGGLTEDITGRQKTTISAAYEETSGTKNVSVS KGNENYWVSGDSVRIVGGASNLYSVGTVQVDTVGGINLFANSGDVNITTPDQFNVHANVISLTSDHKDIS YTNSLKTHAGSTITTIADLSITSMTPFANSLAWANSFTFAPLSETVNAASTNIGGASADIKAFRWSNRAF NQKQESQVSIGPIYVDIKILVLFP |
| Nucleotide Sequence: 2385 bp [Download] |
| >gi|538392231|ref|NC_022247.1|:246754-249138 Variovorax paradoxus B4 chromosome 1, complete sequence ATGCCCAACAGAGTCGTCAAAGCCCACACGCCGCTGGGAGAAGACCAGCTTCTGTTCCGCTCGATGCACG GCACCGAGGGGTTGTCGCAGCTGTTCGAGTTCGAGGTCGACCTGTTGAGCCCGAGCGTGTCGCTCGACAT GAAGTCGGTGCTGGGCAAGCCGCTCTCGCTCGAGATACAGACGGCGGGCGAACCTCGTTTCCTGAATGGG CAGATCGTTCGCTTCACGATGGTCGGCAAGGAAGGGGGCTCGTCGCGCTACGTGCTGTACCGCGCCACTG TGCGGCCCTGGCTCTGGTATCTGACGCGCACCAGCGACTGCAAGATCTTCCAGAACAAGTCGGTCGTCGA CATCCTCCAGGAAGTGTTCGCCGACTACAACTTCGCGTTCGAGAAGAAGCTCAGCGGAACCTACCGCCAG TGGGAGTACTGCGTGCAGTACCAGGAGACCGACTTCGCCTTCGTGAGCCGGTTGATGGAGCATGAAGGCA TCTACTACTACTTCAAGCACGAGAAGGGCGAGCACACGCTGGTGCTTGCCGACGACATCGGCGCCCACGA AACCCTGCCGGGCTATCCGAAGATCAGCTATCTTGCGGCCGACCGCAACCCGGACCCGTTCCAGGAGGTA ATCGACCAGTGGCAGGTGACCGAGGAAATCCGCCCCGGCACCTATGTGGTGGACGACTACGATTTCAAGA AGTCGAAGGCCGACCTCATGGGCATGCGCAGCCAGCCGCGCGGGAATCCTCACGACACCTACGAGATCTA CGAATGGCTGGGCGGCTTCAGCGAGGCCGAGCAGGGCGAGCACTACTCGCGCATCCGGCTCGAAGAGGCG CAATCGCAGGCCGAGCGCGACGTCGGCCACTCCAGCGTGCGTGGCATGGCGCCGGGCTACCGCTTCACGA TGCAGAACTGCCCGCGGCAGGACGACAACCGCGAATACCTGATCGTGTCGGTGTCCTATGCGCTGCGCGA AGGCGGGTATGAGAGCGGTGCGGCCGAAAGCCACTACAGCTTCAGCTTCGCGGTGCAGCCGACCTCGTAC GCATTCCGTCCGCCGCGCGTCACGCCGATGACCCGGACCAACGGGCCGCAGACCGCGACGGTGGTGGGCA GGGCAGGCCAGGAGTACTGGGTCGACCAATACGGCCGCGTGAAGGTGCAGTTCCGCTGGGACCGCTACGG CAAGAGCGACGAGAACAGCTCATGCTGGGTGCGCGTTTCCAGCGCCTGGGCCGGCTCGAACTACGGCGCC GTCAATCATCCGCGCAAGGGCCAGGAAGTGATCGTCGATTTCATCGGCGGCCATCCCGACCGGCCCATCA TCATCGGCCGCGTCTACAACTCCGACCAGATGCCGCCGCTGGAACTGCCCGCGAAGGTTACCGTGAGCGG CTTCGTGAGCCGCAGCCAGGACGGCACGCCGGCGAATGCCAACGAGTTCATTCTGGACGATGCGCCGGGC TGCGAACTGGTCCGGATTCATGCCGAGAAGGATTTCGAGCTCGATGTGGAAGCGGACGAGCGCGACACCA TCGCCGGCGATCGCACCACGGTGATCGAGGGCGCCGACGACTACACCACCAACACCTCGCTCACCGAGAC GATCAACGGCCCGCATACCGTGACGGTCAACGAGGGGGGACCGCAGAACATCACCGTCAATGGCGGTCCG CAGAACGTCAAGATCAAAGGTGGCAACCAAGATGTCTACGTCGATGGCGACCAGATCATTCACGTGACCG GCAGTCGCACAGACACGGTGGACAGCGGCGAGACCCGGACGATAACTGGTGGTTTGACCGAAGATATAAC GGGACGTCAGAAAACGACGATTTCCGCAGCATATGAAGAAACCTCAGGAACCAAGAATGTTTCGGTCAGC AAGGGAAACGAAAACTATTGGGTGAGTGGAGACAGCGTTCGGATTGTTGGAGGCGCGTCAAATCTGTATT CGGTCGGGACGGTTCAGGTCGACACCGTCGGCGGCATAAATCTCTTTGCGAACTCAGGCGACGTCAACAT AACGACGCCGGATCAGTTCAACGTGCACGCGAACGTCATCAGCCTGACTTCGGACCACAAGGACATCAGT TACACGAATTCGCTGAAGACCCATGCCGGCAGCACGATCACCACCATCGCGGACCTGTCCATCACGTCGA TGACGCCGTTTGCAAATTCGCTGGCTTGGGCGAATTCATTTACCTTCGCACCGCTGTCGGAGACCGTCAA CGCGGCGAGCACCAACATCGGCGGCGCCAGTGCCGACATCAAAGCCTTCCGCTGGTCGAACCGAGCTTTC AACCAAAAACAGGAATCCCAGGTCTCGATCGGTCCAATCTACGTGGACATCAAGATTCTGGTGCTCTTTC CGTGA |
| Protein ID: 538392494 |
| SecReT6 ID | 845 |
| T6SS type | i3 |
| Gene symbol | - |
| Locus tag | VAPA_1c02640 |
| Strain | Variovorax paradoxus B4 |
| Replicon | chromosome I [GenBank: NC_022247] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 281217..281744 [-] |
| Product | hypothetical protein |
| Note | TssI |
| UniProt ID | T1X4X3 |
| KEGG ID | vpd:VAPA_1c02640 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | NA |
| Protein Sequence: 175 a.a. [Download] |
| >gi|538392494|ref|YP_008514067.1| hypothetical protein VAPA_1c02640 [Variovorax paradoxus B4] MHANDRRANPPALPSLQGDALLEELIAKPADKPERRGAQGIVLGTLVDLGVEGAEKAVPRVRLAGMGTMD VLCSLVPLAATDVGSTVALGFSGVDMRQAIILGLVWEPQEQRPPAPAVPRGDGRVVIEATNEIELRCGES ALILSADGRIQLRGHYITSHASATQRILGGSVNVN |
| Nucleotide Sequence: 528 bp [Download] |
| >gi|538392231|ref|NC_022247.1|:c281744-281217 Variovorax paradoxus B4 chromosome 1, complete sequence GTGCACGCCAACGACCGTCGCGCCAATCCGCCCGCGTTGCCATCGCTTCAGGGCGATGCGCTGCTCGAGG AGCTGATTGCAAAGCCCGCCGACAAGCCAGAGCGCCGTGGCGCGCAGGGCATCGTGCTCGGCACGTTGGT CGATCTGGGTGTCGAAGGTGCGGAGAAGGCCGTGCCGCGCGTGCGCCTGGCCGGCATGGGCACGATGGAC GTGCTGTGTTCGCTGGTGCCGCTGGCCGCGACCGATGTAGGAAGCACGGTGGCACTGGGTTTCAGTGGCG TCGACATGCGCCAGGCCATCATCCTGGGCCTTGTGTGGGAGCCGCAGGAGCAAAGACCACCAGCACCAGC CGTGCCGCGCGGCGACGGGCGCGTTGTCATCGAAGCAACAAATGAGATCGAACTGCGCTGCGGCGAGTCG GCACTCATCCTCTCGGCTGACGGTCGCATCCAGCTGCGCGGTCACTACATCACCAGCCATGCCAGCGCGA CTCAGCGCATTCTGGGCGGCTCGGTCAACGTCAATTGA |
| Protein ID: 538392495 |
| SecReT6 ID | 845 |
| T6SS type | i3 |
| Gene symbol | - |
| Locus tag | VAPA_1c02650 |
| Strain | Variovorax paradoxus B4 |
| Replicon | chromosome I [GenBank: NC_022247] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 281747..284032 [-] |
| Product | type VI secretion system protein, Vgr family |
| Note | TssI |
| UniProt ID | T1X5E4 |
| KEGG ID | vpd:VAPA_1c02650 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 6.90E-72, Aligned region: 37..351 Phage_base_V [PF04717], Evalue: 2.20E-26, Aligned region: 389..482 Gp5_C [PF06715], Evalue: 8.60E-20, Aligned region: 534..553 Gp5_C [PF06715], Evalue: 8.60E-20, Aligned region: 550..571 Gp5_C [PF06715], Evalue: 8.60E-20, Aligned region: 565..587 Gp5_C [PF06715], Evalue: 8.60E-20, Aligned region: 573..596 Gp5_C [PF06715], Evalue: 8.60E-20, Aligned region: 590..612 Gp5_C [PF06715], Evalue: 8.60E-20, Aligned region: 614..628 Gp5_C [PF06715], Evalue: 8.60E-20, Aligned region: 630..651 |
| Protein Sequence: 761 a.a. [Download] |
| >gi|538392495|ref|YP_008514068.1| type VI secretion system protein, Vgr family [Variovorax paradoxus B4] MPTGTAQLARVLSVSSSAMPMLGGEPALEPIAIEGDEGLSRLFHYTLTLATPEQPGYNERQAANVAIKQL VGEALTAHIVLDGRPGSGPQRRHLSGLVTRVRFLRLENRRALYEAVIEPWLTLGTRTSDYRIFQNQNVLD IVREVLGKYGLPFDVRAVRSYPPREFQVQYGESDYDFVARLLHEWGLYFYFEHEESSHKLVIVDDMASHQ PFAHAGYQRIPFHAAEATVREEHCDRFNACEALQSGRWVIGDFDFKRPKAELQQVSAMPRKTAQNTWERY GWPGDYVVESEGEQLVRTRMEETGSQGERAGGSGNLRAVVPGCLVTLERHPQNESNREYLVTDARLRLQD VGDASAQQEFECRVDFEVIPTSKVFRASAPPVPRPRTTGPQTAIVTGPAGREIWTDEYGRVKLSFHWNRY CTKDENSSCWVRVSSPWAGTNFGGIQIPRIGQEVIVDFENGDPDRPIVTGRVYNADNMPPWTLPDNATQS GLLTRSSEGATDANANALRFEDKKGQEQLWLHAERNQDIEVERDETHWVGNDRTKTIDRDETVHVKHDRT ETVDHDETITVHNNRTETVDGNETITIHKNRTETVDLDETITVHKNRTETVDLNETIGIGMNRTETVGMN ETIDIGDNRVVTIGGNKAETVALAKAETIGLAKALTIGLGYQVSVGAAMNTSVALMQTEQVGRSKRVDVR NTFDITAGDEFSITVGKSTLVMKSDGTITFNGHTFNVGTSGEQYFNADGHITSKANKIQEN |
| Nucleotide Sequence: 2286 bp [Download] |
| >gi|538392231|ref|NC_022247.1|:c284032-281747 Variovorax paradoxus B4 chromosome 1, complete sequence ATGCCAACAGGCACCGCACAGCTTGCGCGCGTTCTCAGCGTTTCATCGTCGGCCATGCCCATGCTGGGCG GCGAGCCGGCCCTGGAGCCCATCGCCATCGAAGGCGACGAAGGGCTCAGCAGGCTGTTCCATTACACCCT GACCCTGGCCACCCCCGAGCAGCCCGGCTACAACGAACGCCAGGCCGCCAACGTGGCCATCAAGCAGCTG GTGGGCGAGGCGCTCACGGCGCACATCGTGCTCGATGGACGCCCGGGCTCGGGCCCGCAGCGGCGCCATC TCTCGGGCCTTGTGACGCGCGTGCGCTTCTTGCGTCTGGAGAACCGGCGTGCGCTGTACGAAGCCGTGAT CGAGCCCTGGCTCACGCTGGGCACGCGCACCAGCGACTACCGCATCTTCCAGAACCAGAACGTGCTGGAC ATCGTCAGGGAGGTGCTCGGCAAGTACGGGCTTCCCTTCGACGTGCGGGCCGTGCGCAGCTATCCGCCGC GCGAGTTCCAGGTGCAGTACGGCGAAAGCGACTACGACTTCGTCGCACGGCTGCTGCACGAGTGGGGCCT GTACTTCTACTTCGAGCACGAAGAGAGCAGTCACAAGCTGGTGATCGTCGACGACATGGCGTCGCACCAG CCCTTCGCCCATGCGGGCTACCAGCGCATTCCCTTCCATGCGGCGGAGGCCACCGTGCGCGAGGAGCATT GCGACCGCTTCAACGCCTGCGAGGCGCTGCAAAGCGGCCGCTGGGTGATCGGCGACTTCGACTTCAAGCG CCCGAAGGCCGAGCTGCAGCAGGTCAGCGCCATGCCGCGCAAGACGGCGCAGAACACCTGGGAGCGCTAT GGCTGGCCGGGCGACTACGTGGTGGAGTCCGAAGGCGAGCAGCTGGTGCGCACGCGCATGGAAGAGACCG GCAGCCAGGGCGAGCGCGCCGGCGGCTCGGGCAACCTGCGCGCGGTGGTGCCGGGCTGCCTGGTCACGCT GGAGCGCCATCCCCAGAACGAGTCGAACCGCGAGTACCTGGTGACGGACGCCCGCTTGCGGCTGCAGGAC GTGGGCGATGCCAGTGCGCAGCAGGAATTCGAGTGCCGCGTCGATTTCGAGGTGATTCCGACGAGCAAGG TGTTCAGGGCATCGGCCCCGCCGGTGCCCAGGCCGCGCACCACGGGCCCGCAGACGGCGATCGTCACGGG CCCGGCCGGCCGCGAGATCTGGACCGATGAATACGGCCGCGTGAAGCTCAGCTTCCACTGGAACCGCTAC TGCACGAAGGACGAGAACAGCTCGTGCTGGGTGCGCGTGTCCTCGCCCTGGGCCGGCACCAATTTCGGCG GCATCCAGATCCCGCGCATCGGCCAGGAGGTGATCGTCGACTTCGAGAACGGCGACCCCGACCGCCCCAT CGTCACGGGGCGCGTCTACAACGCCGACAACATGCCGCCGTGGACCCTGCCGGACAACGCCACGCAAAGC GGCCTGCTCACGCGCAGCTCCGAAGGCGCGACCGATGCCAATGCCAATGCGCTGCGCTTCGAGGACAAGA AGGGCCAGGAGCAGCTGTGGCTGCATGCGGAGCGCAACCAGGACATCGAGGTCGAGCGCGACGAGACGCA CTGGGTGGGCAACGACCGCACCAAGACCATCGACCGCGACGAAACCGTGCATGTGAAGCACGACCGCACG GAGACCGTCGATCACGACGAGACCATCACCGTCCACAACAACCGCACCGAGACGGTCGATGGCAACGAGA CGATCACGATCCACAAGAACCGCACCGAGACCGTGGACCTCGACGAGACCATCACGGTGCACAAGAACCG CACCGAGACCGTCGACCTCAACGAGACCATCGGCATCGGCATGAACCGCACCGAGACGGTGGGCATGAAC GAGACCATCGACATCGGCGACAACCGCGTGGTGACCATCGGCGGCAACAAGGCCGAGACGGTGGCCCTGG CCAAGGCCGAGACCATCGGCCTTGCCAAGGCGCTGACCATCGGCCTGGGCTACCAGGTGTCGGTGGGCGC GGCAATGAACACCAGCGTGGCGCTGATGCAGACCGAGCAGGTCGGGCGCTCCAAGCGCGTCGATGTGCGC AACACCTTCGATATAACCGCGGGCGACGAATTCAGCATCACGGTCGGTAAGTCCACGCTGGTGATGAAGT CCGATGGCACCATCACCTTCAACGGCCACACCTTCAACGTCGGCACGAGCGGCGAGCAGTATTTCAACGC CGATGGACACATCACGTCGAAGGCGAACAAGATCCAGGAGAACTGA |