SecReT6
Protein ID: 78047683
SecReT6 ID101
T6SS typei3
Gene symbolclpB1
Locus tagXCV2127
StrainXanthomonas campestris pv. vesicatoria str. 85-10
Repliconchromosome [GenBank: NC_007508] [Browse all T6SS(s) in this replicon]
Location [Strand]2438174..2440912 [+]
ProductATP-dependent Clp protease subunit
NoteTssH
UniProt IDQ3BTQ5
KEGG IDxcv:XCV2127
PDB IDNA
Domain hit(s) vs Pfam AAA_2 [PF07724], Evalue: 9.90E-41, Aligned region: 225..245
AAA_2 [PF07724], Evalue: 9.90E-41, Aligned region: 645..811
AAA [PF00004], Evalue: 1.40E-17, Aligned region: 225..337
AAA [PF00004], Evalue: 1.40E-17, Aligned region: 651..735
ClpB_D2-small [PF10431], Evalue: 7.00E-15, Aligned region: 818..894
AAA_5 [PF07728], Evalue: 5.90E-12, Aligned region: 225..245
AAA_5 [PF07728], Evalue: 5.90E-12, Aligned region: 359..392
AAA_5 [PF07728], Evalue: 5.90E-12, Aligned region: 650..768
AAA_16 [PF13191], Evalue: 2.30E-10, Aligned region: 202..248
AAA_16 [PF13191], Evalue: 2.30E-10, Aligned region: 269..303
AAA_16 [PF13191], Evalue: 2.30E-10, Aligned region: 517..566
AAA_16 [PF13191], Evalue: 2.30E-10, Aligned region: 621..693
AAA_16 [PF13191], Evalue: 2.30E-10, Aligned region: 715..736
Sigma54_activat [PF00158], Evalue: 4.30E-07, Aligned region: 203..247
Sigma54_activat [PF00158], Evalue: 4.30E-07, Aligned region: 649..763
Zeta_toxin [PF06414], Evalue: 5.50E-06, Aligned region: 224..247
Zeta_toxin [PF06414], Evalue: 5.50E-06, Aligned region: 649..690
Zeta_toxin [PF06414], Evalue: 5.50E-06, Aligned region: 820..857
AAA_22 [PF13401], Evalue: 1.20E-05, Aligned region: 224..259
AAA_22 [PF13401], Evalue: 1.20E-05, Aligned region: 357..391
AAA_22 [PF13401], Evalue: 1.20E-05, Aligned region: 648..673
AAA_22 [PF13401], Evalue: 1.20E-05, Aligned region: 712..734
AAA_14 [PF13173], Evalue: 5.30E-05, Aligned region: 225..293
AAA_14 [PF13173], Evalue: 5.30E-05, Aligned region: 331..391
AAA_14 [PF13173], Evalue: 5.30E-05, Aligned region: 649..760
NACHT [PF05729], Evalue: 6.60E-05, Aligned region: 225..252
NACHT [PF05729], Evalue: 6.60E-05, Aligned region: 650..677
AAA_17 [PF13207], Evalue: 0.00012, Aligned region: 225..253
AAA_17 [PF13207], Evalue: 0.00012, Aligned region: 650..688
AAA_19 [PF13245], Evalue: 0.00016, Aligned region: 222..248
AAA_19 [PF13245], Evalue: 0.00016, Aligned region: 648..672
AAA_25 [PF13481], Evalue: 0.00019, Aligned region: 220..301
AAA_25 [PF13481], Evalue: 0.00019, Aligned region: 351..396
AAA_25 [PF13481], Evalue: 0.00019, Aligned region: 648..675
Arch_ATPase [PF01637], Evalue: 0.00088, Aligned region: 203..245
Arch_ATPase [PF01637], Evalue: 0.00088, Aligned region: 276..332
Arch_ATPase [PF01637], Evalue: 0.00088, Aligned region: 649..691
Arch_ATPase [PF01637], Evalue: 0.00088, Aligned region: 716..732
IstB_IS21 [PF01695], Evalue: 0.0012, Aligned region: 218..246
IstB_IS21 [PF01695], Evalue: 0.0012, Aligned region: 650..669
AAA_29 [PF13555], Evalue: 0.0048, Aligned region: 217..240
AAA_29 [PF13555], Evalue: 0.0048, Aligned region: 648..675
AAA_18 [PF13238], Evalue: 0.0048, Aligned region: 225..245
AAA_18 [PF13238], Evalue: 0.0048, Aligned region: 651..681
DUF815 [PF05673], Evalue: 0.0069, Aligned region: 215..300
DUF815 [PF05673], Evalue: 0.0069, Aligned region: 649..688
Protein Sequence: 912 a.a.     [Download]
>gi|78047683|ref|YP_363858.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv. vesicatoria str. 85-10]
MADISRAALFGKLNKTTYRGIESATAFCRLRGDREVDLLHWLHQLLQAQDGDLHRIVRHFSLDAARLALD
LTAALDRLPRGGGGHFDLSASVEEAVERAWVHCTLRYGRQRIRGGDLLVAILHTRSLRNGLLAMSSEFGK
LRAEALADDLDAIVAGSPEDDATDIAAASAPAGPAAAGGTAALALYTVDLTAQAREGKLDPIIGRDDEIR
QVVDILMRRRQNNPILVGEAGVGKTAVVEGFAQRIARGDVPPALKDVQLRTLDVGLLQAGASMKGEFEQR
LRAVIDEVQASPKPIILFVDETHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTFAEYKKYIEKDPA
LTRRFQAVQVDEPDEAKAVRMMRGVASMMEQHHRVQILDEALEAAVKLSHRYIPARQLPDKSVSLLDTAC
ARVAVSLHATPAEVDDSRRRIESLETEHAIIERERAIGIVVEERAAACANLLQSEHSRLRELDQRWVGEK
ALVDELLSLRAQLRSSNSSVEGTGSALEAEADTDADAAADAAVAQSASGDTAVLDAPVQVDRDTLLARLQ
LVQAELAALQGESPLILPTVDYQAVAAVVADWTGIPVGRMARNEIDTVLRLPDLLAKRVIGQDHAMEMIA
KRIQTSRAGLDNPDKPIGVFLLAGTSGVGKTETALALAETLYGGEQNLITINMSEYQEAHTVSSLKGAPP
GYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAG
TDLIASLCKDPELIPDPEAMAKAIREPLLKVFPPALLGRLVAIPYYPLSNDMLGQIVRLQLNRIKKRIEE
RYKIPFEYDHSVVELVVSRCTESESGGRMIDAILTNSMLPEISRQFLTRVIEGKKINHSRASAVADGFFY
EF
 
Nucleotide Sequence: 2739 bp     [Download]
>gi|78045556|ref|NC_007508.1|:2438174-2440912 Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome
ATGGCAGACATCAGTCGCGCCGCCTTGTTCGGCAAGCTCAACAAGACCACGTATCGCGGCATCGAATCGG
CCACCGCCTTCTGCAGGCTGCGTGGCGACCGCGAGGTGGATCTGCTGCATTGGCTGCATCAGTTGCTGCA
GGCGCAAGACGGCGACCTGCATCGCATCGTGCGTCATTTTTCGCTCGATGCGGCGCGACTTGCGCTGGAC
CTGACCGCAGCGCTCGATCGGCTGCCGCGTGGCGGTGGCGGGCATTTCGATCTGTCGGCCAGCGTGGAGG
AGGCAGTGGAACGCGCCTGGGTGCACTGCACGCTGCGCTACGGCCGGCAGCGCATCCGGGGCGGCGACCT
GCTGGTGGCGATCCTGCATACGCGCAGCCTGCGCAACGGCTTGCTGGCAATGTCCAGCGAGTTCGGCAAG
CTGCGCGCAGAGGCGCTGGCCGACGATCTGGACGCCATCGTCGCCGGCTCGCCGGAGGACGATGCCACCG
ATATTGCGGCGGCCAGCGCTCCCGCCGGACCAGCCGCCGCTGGTGGGACTGCCGCGCTCGCGCTGTATAC
GGTCGACCTCACCGCACAAGCACGCGAGGGCAAGCTAGACCCGATCATCGGCCGCGACGACGAGATCCGC
CAGGTCGTCGATATCCTGATGCGCCGCCGCCAGAACAACCCGATCCTGGTCGGCGAGGCCGGTGTCGGCA
AGACCGCGGTGGTGGAAGGCTTCGCACAACGCATCGCGCGCGGCGATGTGCCGCCCGCGTTGAAGGATGT
GCAGCTGCGCACGCTGGATGTGGGCCTGCTGCAGGCCGGCGCCAGCATGAAGGGCGAATTCGAGCAACGC
CTGCGCGCAGTCATCGACGAAGTGCAGGCCAGCCCCAAGCCGATCATTTTGTTTGTCGACGAAACCCACA
CCCTGGTCGGCGCCGGTGGCGCGGCCGGTACCGGCGATGCGGCCAACCTGCTCAAGCCCGCACTGGCGCG
TGGCACCTTGCGCACCGTGGGGGCGACCACGTTTGCCGAGTACAAGAAGTACATCGAAAAGGATCCGGCA
TTGACGCGACGTTTCCAGGCCGTGCAGGTGGACGAGCCGGACGAAGCCAAGGCGGTGCGCATGATGCGCG
GCGTCGCTTCGATGATGGAACAGCACCACCGTGTGCAGATCCTGGACGAAGCGCTGGAAGCGGCAGTCAA
GCTCAGTCACCGCTACATCCCGGCGCGGCAGCTGCCGGACAAATCGGTGAGCCTACTCGACACCGCCTGC
GCGCGCGTGGCGGTGAGCCTGCACGCTACGCCTGCGGAAGTGGACGACAGTCGCCGCCGCATCGAATCGC
TGGAGACCGAACACGCCATCATCGAACGCGAGCGTGCGATTGGTATCGTGGTGGAGGAGCGTGCTGCCGC
TTGCGCCAACCTGCTGCAAAGCGAGCATAGCCGCCTGCGCGAGCTGGACCAGCGCTGGGTTGGCGAGAAG
GCATTGGTGGACGAGCTGTTGTCGTTGCGCGCACAACTGCGTAGCAGTAATTCATCGGTGGAAGGCACCG
GCAGTGCGTTGGAAGCAGAGGCCGACACCGACGCAGATGCCGCCGCAGATGCCGCTGTCGCGCAGTCGGC
GTCTGGCGACACTGCCGTGCTCGACGCACCGGTACAAGTTGATCGCGACACCTTACTGGCACGTCTGCAG
CTGGTGCAGGCTGAACTGGCAGCATTACAAGGCGAATCGCCGCTGATCCTACCCACGGTCGATTACCAGG
CGGTCGCCGCCGTGGTCGCCGACTGGACCGGCATCCCGGTCGGGCGCATGGCGCGCAACGAGATCGACAC
CGTGCTGCGCCTGCCCGACCTGCTGGCCAAGCGCGTGATCGGCCAGGACCACGCCATGGAAATGATCGCC
AAGCGCATCCAGACCAGCCGCGCCGGTCTGGACAACCCGGACAAACCGATCGGCGTGTTTCTGCTGGCCG
GCACCTCCGGCGTCGGCAAGACCGAAACCGCACTCGCGCTGGCCGAAACCTTGTACGGCGGCGAACAAAA
TCTGATCACCATCAACATGAGCGAGTACCAGGAAGCGCATACCGTCTCCTCGCTCAAGGGTGCACCGCCG
GGCTATGTGGGCTACGGCGAAGGCGGCGTGCTCACCGAAGCGGTGCGCCGCAAGCCGTACTCGGTGGTGC
TGCTGGACGAAGTGGAGAAAGCCCACCCGGACGTGCACGAACTGTTCTTCCAGGTCTTCGACAAGGGCTG
GATGGAAGACGGCGAAGGCCGCCGCATCGACTTCCGCAATACCTTGATCATCCTCACCAGCAACGCCGGC
ACCGACCTGATCGCCAGCCTGTGCAAGGACCCGGAGCTGATACCCGACCCGGAAGCCATGGCCAAGGCCA
TCCGCGAGCCGTTGTTGAAGGTGTTTCCGCCGGCATTGCTCGGGCGGCTGGTGGCGATTCCGTATTACCC
GCTGAGCAACGACATGCTCGGCCAGATCGTGCGGTTGCAGTTGAATCGCATCAAGAAGCGCATCGAGGAG
CGCTACAAGATTCCGTTCGAGTACGACCACTCGGTGGTGGAGCTGGTGGTATCGCGGTGCACTGAAAGCG
AGTCGGGCGGACGAATGATTGATGCGATTTTGACTAACTCGATGTTGCCGGAGATCAGTCGGCAGTTTCT
CACTCGGGTGATTGAGGGCAAGAAAATCAATCATTCGCGCGCATCGGCCGTGGCGGATGGCTTTTTCTAC
GAATTCTGA