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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Bcep18194_B0965 | 1077810..1079012 [+], 1203 | 78061815 | D-isomer specific 2-hydroxyacid dehydrogenase | |
2 | Bcep18194_B0966 | 1079053..1080192 [-], 1140 | 78061816 | patatin | |
3 | Bcep18194_B0967 | 1080404..1080865 [-], 462 | 78061817 | hypothetical protein | |
4 | Bcep18194_B0968 | 1080960..1081292 [-], 333 | 78061818 | plastocyanin | |
5 | Bcep18194_B0969 | 1081318..1082262 [-], 945 | 78061819 | metallophosphoesterase | |
6 | Bcep18194_B0970 | 1082518..1084107 [+], 1590 | 78061820 | phosphate transporter | |
7 | Bcep18194_B0971 | 1084189..1085940 [+], 1752 | 78061821 | ABC anion transporter, fused inner membrane subunits | |
8 | Bcep18194_B0972 | 1085952..1087298 [+], 1347 | 78061822 | nitrate/sulfonate/bicarbonate ABC transporter ATPase | |
9 | Bcep18194_B0973 | 1087349..1088467 [-], 1119 | 78061823 | ImpA-like protein | TssA |
10 | Bcep18194_B0974 | 1088464..1089519 [-], 1056 | 78061824 | hypothetical protein | TssG |
11 | Bcep18194_B0975 | 1089519..1091408 [-], 1890 | 78061825 | hypothetical protein | TssF |
12 | Bcep18194_B0976 | 1091446..1092018 [-], 573 | 78061826 | hypothetical protein | TssE |
13 | Bcep18194_B0977 | 1092011..1092865 [-], 855 | 78061827 | virulence protein, SciE type | TagJ |
14 | Bcep18194_B0978 | 1092862..1093512 [-], 651 | 78061828 | hypothetical protein | |
15 | Bcep18194_B0979 | 1094050..1096731 [+], 2682 | 78061829 | ATPase AAA | TssH |
16 | Bcep18194_B0980 | 1096768..1097307 [+], 540 | 78061830 | hypothetical protein | TssB |
17 | Bcep18194_B0981 | 1097335..1098828 [+], 1494 | 78061831 | hypothetical protein | TssC |
18 | Bcep18194_B0982 | 1098922..1099407 [+], 486 | 78061832 | hypothetical protein | TssD |
19 | Bcep18194_B0983 | 1099487..1099990 [+], 504 | 78061833 | hypothetical protein | TssJ |
20 | Bcep18194_B0984 | 1100022..1101368 [+], 1347 | 78061834 | hypothetical protein | TssK |
21 | Bcep18194_B0985 | 1101550..1104081 [+], 2532 | 78061835 | Rhs element Vgr protein | TssI |
22 | Bcep18194_B0986 | 1104053..1104976 [+], 924 | 78061836 | hypothetical protein | |
23 | Bcep18194_B0987 | 1104973..1105494 [+], 522 | 78061837 | hypothetical protein | |
24 | Bcep18194_B0988 | 1105593..1106120 [+], 528 | 78061838 | hypothetical protein | |
25 | Bcep18194_B0989 | 1106133..1108508 [+], 2376 | 78061839 | hypothetical protein | |
26 | Bcep18194_B0990 | 1108534..1108815 [+], 282 | 78061840 | hypothetical protein | PAAR |
27 | Bcep18194_B0991 | 1108818..1110122 [+], 1305 | 78061841 | hypothetical protein | TssL |
28 | Bcep18194_B0992 | 1110148..1114257 [+], 4110 | 78061842 | hypothetical protein | TssM |
29 | Bcep18194_B0993 | 1114275..1115489 [+], 1215 | 78061843 | OmpA/MotB family outer membrane protein | TssL |
30 | Bcep18194_B0994 | 1115779..1116720 [+], 942 | 78061844 | hypothetical protein | |
31 | Bcep18194_B0995 | 1116699..1117577 [-], 879 | 78061845 | RpiR family transcriptional regulator | |
32 | Bcep18194_B0996 | 1117941..1119692 [+], 1752 | 78061846 | gamma-glutamyltransferase 1 | |
33 | Bcep18194_B0997 | 1119870..1121246 [+], 1377 | 78061847 | Sodium/dicarboxylate symporter | |
34 | Bcep18194_B0998 | 1121276..1121674 [-], 399 | 78061848 | hypothetical protein | |
35 | Bcep18194_B0999 | 1121719..1123011 [-], 1293 | 78061849 | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | |
36 | Bcep18194_B1000 | 1123200..1123814 [+], 615 | 78061850 | TetR family transcriptional regulator | |
37 | Bcep18194_B1001 | 1123839..1124750 [-], 912 | 78061851 | LysR family transcriptional regulator | |
38 | Bcep18194_B1002 | 1124859..1125620 [+], 762 | 78061852 | Short-chain dehydrogenase/reductase SDR | |
39 | Bcep18194_B1003 | 1125676..1126155 [-], 480 | 78061853 | MerR family transcriptional regulator | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein