 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Gmet_3303 | 3716370..3717716 [-], 1347 | 78224494 | hypothetical protein | |
2 | Gmet_3304 | 3717764..3719077 [-], 1314 | 78224495 | Acetyl-CoA hydrolase/transferase | |
3 | Gmet_3305 | 3719175..3720299 [-], 1125 | 78224496 | enoyl-CoA hydratase/isomerase | |
4 | Gmet_3306 | 3720361..3721503 [-], 1143 | 78224497 | Acyl-CoA dehydrogenase-like | |
5 | Gmet_3307 | 3721550..3722692 [-], 1143 | 78224498 | Acyl-CoA dehydrogenase-like | |
6 | Gmet_3308 | 3722946..3724592 [+], 1647 | 78224499 | sigma-54 dependent trancsriptional regulator | |
7 | Gmet_3309 | 3724596..3725057 [-], 462 | 78224500 | NUDIX hydrolase | |
8 | Gmet_3310 | 3725357..3725911 [+], 555 | 78224501 | lipoprotein | TssJ |
9 | Gmet_3311 | 3725908..3727299 [+], 1392 | 78224502 | hypothetical protein | TssK |
10 | Gmet_3312 | 3727303..3727713 [+], 411 | 78224503 | hypothetical protein | TssE |
11 | Gmet_3313 | 3727743..3729473 [+], 1731 | 78224504 | hypothetical protein | TssF |
12 | Gmet_3314 | 3729437..3730426 [+], 990 | 78224505 | hypothetical protein | TssG |
13 | Gmet_3315 | 3730457..3733093 [+], 2637 | 78224506 | AAA ATPase | TssH |
14 | Gmet_3316 | 3733090..3733536 [+], 447 | 78224507 | lipoprotein | |
15 | Gmet_3317 | 3733840..3734340 [+], 501 | 78224508 | CheW protein | |
16 | Gmet_3318 | 3734343..3734855 [+], 513 | 78224509 | hypothetical protein | |
17 | Gmet_3319 | 3734852..3735802 [+], 951 | 78224510 | F420-non-reducing hydrogenase subunit G | |
18 | Gmet_3320 | 3735780..3737201 [+], 1422 | 78224511 | nickel-dependent hydrogenase, large subunit | |
19 | Gmet_3321 | 3737201..3737452 [+], 252 | 78224512 | ferredoxin family protein | |
20 | Gmet_3322 | 3737449..3737907 [+], 459 | 78224513 | hypothetical protein | |
21 | Gmet_3323 | 3737925..3738389 [+], 465 | 78224514 | peptidase M52, hydrogen uptake protein | |
22 | Gmet_3324 | 3738391..3739995 [+], 1605 | 78224515 | methyl-accepting chemotaxis sensory transducer | |
23 | Gmet_3325 | 3740078..3741382 [-], 1305 | 78224516 | aminotransferase | |
24 | Gmet_3326 | 3741635..3742225 [-], 591 | 78224517 | hypothetical protein | |
25 | Gmet_3327 | 3742228..3742692 [-], 465 | 78224518 | hypothetical protein | |
26 | Gmet_3328 | 3742700..3743050 [-], 351 | 78224519 | glyoxalase/bleomycin resistance protein/dioxygenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein