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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Jann_3008 | 3028342..3028701 [-], 360 | 89055499 | hypothetical protein | |
2 | Jann_3009 | 3028901..3029140 [+], 240 | 89055500 | AbrB family transcriptional regulator | |
3 | Jann_3010 | 3029137..3029532 [+], 396 | 89055501 | twitching motility protein PilT | |
4 | Jann_3011 | 3029685..3030146 [-], 462 | 89055502 | hypothetical protein | |
5 | Jann_3012 | 3031360..3032349 [-], 990 | 89055503 | hypothetical protein | |
6 | Jann_3013 | 3032562..3033326 [-], 765 | 89055504 | hypothetical protein | |
7 | Jann_3014 | 3033323..3034330 [-], 1008 | 89055505 | hypothetical protein | |
8 | Jann_3015 | 3034350..3035471 [-], 1122 | 89055506 | hypothetical protein | |
9 | Jann_3016 | 3035468..3036430 [-], 963 | 89055507 | hypothetical protein | |
10 | Jann_3017 | 3036445..3036804 [-], 360 | 89055508 | hypothetical protein | |
11 | Jann_3018 | 3037038..3037970 [-], 933 | 89055509 | hypothetical protein | |
12 | Jann_3019 | 3037974..3038411 [-], 438 | 89055510 | hypothetical protein | |
13 | Jann_3020 | 3038411..3040627 [-], 2217 | 89055511 | Rhs element Vgr protein | TssI |
14 | Jann_3021 | 3040674..3041729 [-], 1056 | 89055512 | hypothetical protein | |
15 | Jann_3022 | 3041821..3042297 [-], 477 | 89055513 | hypothetical protein | TssD |
16 | Jann_3023 | 3042365..3044959 [-], 2595 | 89055514 | ATPase | TssH |
17 | Jann_3024 | 3045161..3046240 [+], 1080 | 89055515 | hypothetical protein | TssA |
18 | Jann_3025 | 3046392..3046895 [+], 504 | 89055516 | hypothetical protein | TssB |
19 | Jann_3026 | 3046898..3048382 [+], 1485 | 89055517 | hypothetical protein | TssC |
20 | Jann_3027 | 3048384..3049781 [+], 1398 | 89055518 | hypothetical protein | TssC |
21 | Jann_3028 | 3049778..3050575 [+], 798 | 89055519 | virulence protein, SciE type | TagJ |
22 | Jann_3029 | 3050568..3051110 [+], 543 | 89055520 | hypothetical protein | TssE |
23 | Jann_3030 | 3051107..3052885 [+], 1779 | 89055521 | hypothetical protein | TssF |
24 | Jann_3031 | 3052882..3053868 [+], 987 | 89055522 | hypothetical protein | TssG |
25 | Jann_3032 | 3053865..3055115 [+], 1251 | 89055523 | FHA domain-containing protein | Fha |
26 | Jann_3033 | 3055112..3056443 [+], 1332 | 89055524 | hypothetical protein | TssK |
27 | Jann_3034 | 3056440..3057903 [+], 1464 | 89055525 | OmpA/MotB protein | TssL |
28 | Jann_3035 | 3057900..3061373 [+], 3474 | 89055526 | hypothetical protein | TssM |
29 | Jann_3036 | 3061370..3062806 [+], 1437 | 89055527 | hypothetical protein | |
30 | Jann_3037 | 3062843..3063940 [+], 1098 | 89055528 | polysaccharide export protein | |
31 | Jann_3038 | 3064221..3064841 [+], 621 | 89055529 | response regulator receiver/ANTAR domain-containing protein | |
32 | Jann_3039 | 3064838..3066007 [+], 1170 | 89055530 | putative nitrate transport protein | |
33 | Jann_3040 | 3066280..3067638 [+], 1359 | 89055531 | putative nitrate transport protein | |
34 | Jann_3041 | 3067820..3068890 [+], 1071 | 89055532 | binding-protein-dependent transport system inner membrane protein | |
35 | Jann_3042 | 3068903..3070576 [+], 1674 | 89055533 | nitrate transport ATP-binding subunits C and D | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein