 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | UTI89_C3176 (fucU) | 3093393..3093815 [+], 423 | 91212173 | protein of fucose operon | |
2 | UTI89_C3177 (fucR) | 3093864..3094604 [+], 741 | 91212174 | DNA-binding transcriptional activator FucR | |
3 | UTI89_C3178 (ygdE) | 3094648..3095748 [-], 1101 | 91212175 | RNA 2'-O-ribose methyltransferase | |
4 | UTI89_C3179 (ygdD) | 3095741..3096043 [-], 303 | 91212176 | hypothetical protein | |
5 | UTI89_C3180 (gcvA) | 3096155..3097072 [-], 918 | 91212177 | DNA-binding transcriptional activator GcvA | |
6 | UTI89_C3181 | 3097390..3097683 [+], 294 | 91212178 | hypothetical protein | |
7 | UTI89_C3182 | 3097423..3097653 [-], 231 | 91212179 | hypothetical protein | |
8 | UTI89_C3183 | 3097806..3099047 [+], 1242 | 91212180 | cysteine sulfinate desulfinase | |
9 | UTI89_C3184 (ygdK) | 3099047..3099490 [+], 444 | 91212181 | hypothetical protein | |
10 | UTI89_C3185 (ygdL) | 3099541..3100347 [-], 807 | 91212182 | hypothetical protein | |
11 | UTI89_C3186 (mltA) | 3100424..3101521 [-], 1098 | 162138382 | murein transglycosylase A | |
12 | UTI89_C3190 | 3102641..3103162 [+], 522 | 91212184 | hypothetical protein | TssB |
13 | UTI89_C3191 | 3103215..3104759 [+], 1545 | 91212185 | hypothetical protein | TssC |
14 | UTI89_C3192 | 3104777..3106114 [+], 1338 | 91212186 | hypothetical protein | TssK |
15 | UTI89_C3193 | 3106111..3106776 [+], 666 | 91212187 | hypothetical protein | TssL |
16 | UTI89_C3194 | 3106789..3108441 [+], 1653 | 91212188 | hypothetical protein | TagL |
17 | UTI89_C3195 | 3108478..3109080 [-], 603 | 91212189 | hypothetical protein | |
18 | UTI89_C3196 | 3108499..3108990 [+], 492 | 91212190 | secreted protein Hcp | TssD |
19 | UTI89_C3197 | 3109182..3111827 [+], 2646 | 91212191 | ClpB protein | TssH |
20 | UTI89_C3198 | 3111839..3114319 [+], 2481 | 91212192 | hypothetical protein | TssI |
21 | UTI89_C3199 | 3114339..3116108 [+], 1770 | 91212193 | hypothetical protein | Tle4 (e) |
22 | UTI89_C3200 | 3116083..3116916 [+], 834 | 91212194 | hypothetical protein | Tli4 (i) |
23 | UTI89_C3201 | 3116885..3117178 [+], 294 | 91212195 | hypothetical protein | |
24 | UTI89_C3202 | 3117642..3117902 [+], 261 | 91212196 | hypothetical protein | PAAR |
25 | UTI89_C3203 | 3117829..3119040 [+], 1212 | 91212197 | hypothetical protein | |
26 | UTI89_C3204 | 3119050..3122403 [+], 3354 | 91212198 | hypothetical protein | TssM |
27 | UTI89_C3205 | 3122369..3124006 [+], 1638 | 91212199 | hypothetical protein | TssA |
28 | UTI89_C3206 | 3125577..3126218 [+], 642 | 91212200 | hypothetical protein | |
29 | UTI89_C3207 | 3126499..3126918 [+], 420 | 91212201 | hypothetical protein | |
30 | UTI89_C3208 | 3130072..3130608 [+], 537 | 91212202 | hypothetical protein | TssJ |
31 | UTI89_C3209 | 3130612..3131040 [+], 429 | 91212203 | hypothetical protein | TssE |
32 | UTI89_C3210 | 3131040..3132416 [+], 1377 | 91212204 | hypothetical protein | TssA |
33 | UTI89_C3211 | 3131590..3131742 [-], 153 | 91212205 | hypothetical protein | |
34 | UTI89_C3212 | 3132718..3133674 [-], 957 | 91212206 | 2-hydroxyacid dehydrogenase | |
35 | UTI89_C3213 | 3133737..3134333 [-], 597 | 91212207 | phosphosugar isomerase | |
36 | UTI89_C3214 | 3134336..3135511 [-], 1176 | 91212208 | beta-cystathionase | |
37 | UTI89_C3215 | 3135511..3137091 [-], 1581 | 91212209 | PTS system maltose and glucose-specific transporter subunit IIABC | |
38 | UTI89_C3216 | 3137123..3137992 [-], 870 | 91212210 | antiterminator | |
39 | UTI89_C3217 | 3138031..3138183 [+], 153 | 91212211 | hypothetical protein | |
40 | UTI89_C3218 (amiC) | 3138193..3139536 [-], 1344 | 91212212 | N-acetylmuramoyl-L-alanine amidase | |
41 | UTI89_C3219 (argA) | 3139678..3141009 [+], 1332 | 162138381 | N-acetylglutamate synthase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein