 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Bxe_A2108 (catB) | 2600273..2601430 [-], 1158 | 91783706 | muconate cycloisomerase | |
2 | Bxe_A2107 (catR) | 2601535..2602422 [+], 888 | 91783707 | LysR family transcriptional regulator | |
3 | Bxe_A2106 | 2602446..2603399 [-], 954 | 91783708 | LysR family transcriptional regulator | |
4 | Bxe_A2105 | 2603471..2604754 [+], 1284 | 91783709 | (poly)aromatic ring hydroxylating dioxygenase, alpha subunit (Rieske (2Fe-2S) region) | |
5 | Bxe_A2104 | 2604751..2605251 [+], 501 | 91783710 | aromatic-ring-hydroxylating dioxygenase, beta subunit | |
6 | Bxe_A2103 | 2605278..2606594 [+], 1317 | 91783711 | major facilitator superfamily metabolite/H(+) symporter | |
7 | Bxe_A2102 | 2606806..2607183 [+], 378 | 91783712 | hypothetical protein | |
8 | Bxe_A2101 | 2607167..2607709 [+], 543 | 91783713 | hypothetical protein | |
9 | Bxe_A2100 | 2607706..2608830 [+], 1125 | 91783714 | Asp-tRNA Asn/Glu-tRNAGln amidotransferase A subunit | |
10 | Bxe_A2099 | 2608888..2609631 [+], 744 | 91783715 | short-chain dehydrogenase/reductase, TsaC-like | |
11 | Bxe_A2098 | 2609791..2610888 [-], 1098 | 91783716 | cytoplasmic protein | TssA |
12 | Bxe_A2097 | 2611074..2611778 [-], 705 | 91783717 | hypothetical protein | |
13 | Bxe_A2096 | 2612313..2615063 [+], 2751 | 91783718 | ClpA/B-type chaperone, ATPase subunit ClpB, heat shock protein | TssH |
14 | Bxe_A2095 | 2615103..2615651 [+], 549 | 91783719 | cytoplasmic protein | TssB |
15 | Bxe_A2094 | 2615685..2617178 [+], 1494 | 91783720 | cytoplasmic protein | TssC |
16 | Bxe_A2093 | 2617345..2617746 [+], 402 | 91783721 | hypothetical protein | |
17 | Bxe_A2092 | 2617743..2618234 [+], 492 | 91783722 | hypothetical protein | |
18 | Bxe_A2091 | 2618277..2618759 [+], 483 | 91783723 | cytoplasmic protein | TssD |
19 | Bxe_A2090 | 2618874..2619374 [+], 501 | 91783724 | outer membrane lipoprotein | TssJ |
20 | Bxe_A2089 | 2619387..2620733 [+], 1347 | 91783725 | temperature-dependent protein secretion, ImpJ | TssK |
21 | Bxe_A2088 | 2620821..2622152 [+], 1332 | 91783726 | hypothetical protein | TssL |
22 | Bxe_A2087 | 2622274..2623164 [-], 891 | 91783727 | IS3 family transposase orfB | |
23 | Bxe_A2086 | 2623161..2623448 [-], 288 | 91783728 | transposase | |
24 | Bxe_A2085 | 2623466..2627563 [+], 4098 | 91783729 | membrane protein, SciS/IcmF-like | TssM |
25 | Bxe_A2084 | 2627759..2628160 [-], 402 | 91783730 | cation resistance protein, CopC-like | |
26 | Bxe_A2083 | 2628177..2629073 [-], 897 | 91783731 | hypothetical protein | |
27 | Bxe_A2082 | 2629182..2629652 [-], 471 | 91783732 | hypothetical protein | |
28 | Bxe_A2081 | 2629888..2631240 [+], 1353 | 91783733 | TRAP-type uncharacterized transport system, periplasmic component protein | |
29 | Bxe_A2080 | 2631257..2632111 [-], 855 | 91783734 | ProQ activator of osmoprotectant transporter ProP | |
30 | Bxe_A2079 | 2632268..2633179 [+], 912 | 91783735 | LysR family transcriptional regulator | |
31 | Bxe_A2078 | 2633216..2634592 [-], 1377 | 91783736 | major facilitator superfamily metabolite/H(+) symporter | |
32 | Bxe_A2077 | 2634716..2635534 [-], 819 | 91783737 | enoyl-CoA hydratase/isomerase | |
33 | Bxe_A2076 | 2635539..2637116 [-], 1578 | 91783738 | long-chain-fatty acid CoA ligase | |
34 | Bxe_A2075 | 2637109..2637639 [-], 531 | 91783739 | oxidoreductase, iron-sulfur subunit | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein