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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Csal_2249 | 2524439..2525323 [-], 885 | 92114371 | hypothetical protein | |
2 | Csal_2251 | 2526600..2527553 [-], 954 | 92114372 | hypothetical protein | |
3 | Csal_2252 | 2527564..2530191 [-], 2628 | 92114373 | hypothetical protein | |
4 | Csal_2253 | 2530188..2531084 [-], 897 | 92114374 | hypothetical protein | |
5 | Csal_2254 | 2531081..2533708 [-], 2628 | 92114375 | Rhs element Vgr protein | TssI |
6 | Csal_2255 | 2533831..2534100 [+], 270 | 92114376 | hypothetical protein | PAAR |
7 | Csal_2256 | 2534091..2535245 [-], 1155 | 92114377 | hypothetical protein | |
8 | Csal_2257 | 2535248..2536363 [-], 1116 | 92114378 | ImpA-like protein | TssA |
9 | Csal_2258 | 2536669..2537199 [-], 531 | 92114379 | hypothetical protein | TssD |
10 | Csal_2259 | 2537272..2537520 [+], 249 | 92114380 | hypothetical protein | |
11 | Csal_2260 | 2537550..2540042 [-], 2493 | 92114381 | OmpA/MotB protein | TssM |
12 | Csal_2261 | 2540070..2540987 [-], 918 | 92114382 | hypothetical protein | |
13 | Csal_2262 | 2541021..2545028 [-], 4008 | 92114383 | ImcF-like protein | TssM |
14 | Csal_2263 | 2545043..2545756 [-], 714 | 92114384 | hypothetical protein | TssL |
15 | Csal_2264 | 2545753..2547099 [-], 1347 | 92114385 | hypothetical protein | TssK |
16 | Csal_2265 | 2547192..2547737 [-], 546 | 92114386 | putative lipoprotein | TssJ |
17 | Csal_2266 | 2547783..2548430 [+], 648 | 92114387 | hypothetical protein | |
18 | Csal_2267 | 2548679..2549434 [+], 756 | 92114388 | hypothetical protein | |
19 | Csal_2268 | 2549491..2550024 [+], 534 | 92114389 | hypothetical protein | TssB |
20 | Csal_2269 | 2550036..2551535 [+], 1500 | 92114390 | hypothetical protein | TssC |
21 | Csal_2270 | 2551658..2552140 [+], 483 | 92114391 | hypothetical protein | TssE |
22 | Csal_2271 | 2552140..2553975 [+], 1836 | 92114392 | hypothetical protein | TssF |
23 | Csal_2272 | 2554023..2555015 [+], 993 | 92114393 | hypothetical protein | TssG |
24 | Csal_2273 | 2555012..2557681 [+], 2670 | 92114394 | ATPase AAA-2 | TssH |
25 | Csal_2274 | 2557718..2560333 [+], 2616 | 92114395 | Rhs element Vgr protein | TssI |
26 | Csal_2275 | 2560337..2561224 [+], 888 | 92114396 | hypothetical protein | |
27 | Csal_2276 | 2561246..2563888 [+], 2643 | 92114397 | hypothetical protein | |
28 | Csal_2277 | 2563890..2564963 [+], 1074 | 92114398 | hypothetical protein | |
29 | Csal_2278 | 2565323..2567218 [+], 1896 | 92114399 | hypothetical protein | |
30 | Csal_2279 | 2567220..2568296 [+], 1077 | 92114400 | hypothetical protein | |
31 | Csal_2280 | 2568521..2570167 [-], 1647 | 92114401 | serine/threonine protein kinase | |
32 | Csal_2281 | 2570427..2570957 [+], 531 | 92114402 | inorganic diphosphatase | |
33 | Csal_2282 | 2571077..2572162 [-], 1086 | 92114403 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein