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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | YPA_0748 | 860017..861300 [+], 1284 | 108806745 | putative beta-ketoacyl-(acyl-carrier-protein) synthase | |
2 | YPA_0749 | 861293..862039 [+], 747 | 108806746 | putative beta-ketoacyl-(acyl-carrier-protein) reductase | |
3 | YPA_0750 | 862055..863293 [+], 1239 | 108806747 | putative hydroxymethylglutaryl-coenzyme A synthase | |
4 | YPA_0751 | 863286..864005 [+], 720 | 108806748 | enoyl-CoA hydratase | |
5 | YPA_0752 | 863983..864759 [+], 777 | 108806749 | polyketide biosynthesis enoyl-CoA hydratase | |
6 | YPA_0753 | 864762..865550 [+], 789 | 108806750 | putative short chain dehydrogenase | |
7 | YPA_0754 | 865616..866077 [+], 462 | 108806751 | hypothetical protein | |
8 | YPA_0755 | 866115..866363 [+], 249 | 108806752 | putative acyl carrier protein | |
9 | YPA_0756 | 866462..867310 [+], 849 | 108806753 | putative acyl transferase | |
10 | YPA_0757 | 868022..869044 [+], 1023 | 108806754 | transposase for insertion sequence IS100 | |
11 | YPA_0758 | 869044..869823 [+], 780 | 108806755 | transposase/IS protein | |
12 | YPA_0759 | 870258..870758 [+], 501 | 108806756 | hypothetical protein | TssB |
13 | YPA_0760 | 870807..872351 [+], 1545 | 108806757 | hypothetical protein | TssC |
14 | YPA_0761 | 872363..873715 [+], 1353 | 108806758 | hypothetical protein | TssK |
15 | YPA_0762 | 873712..874398 [+], 687 | 108806759 | hypothetical protein | TssL |
16 | YPA_0763 | 874398..876134 [+], 1737 | 108806760 | hypothetical protein | TagL |
17 | YPA_0764 | 876138..876629 [+], 492 | 108806761 | hypothetical protein | TssD |
18 | YPA_0765 | 877017..879659 [+], 2643 | 108806762 | putative ATPase subunit of ATP-dependent protease | TssH |
19 | YPA_0766 | 879662..882010 [+], 2349 | 108806763 | hypothetical protein | TssI |
20 | YPA_0767 | 882095..884326 [+], 2232 | 108806764 | hypothetical protein | |
21 | YPA_0768 | 884323..885096 [+], 774 | 108806765 | hypothetical protein | |
22 | YPA_0769 | 885250..885510 [+], 261 | 108806766 | hypothetical protein | |
23 | YPA_0770 | 885526..887709 [+], 2184 | 108806767 | hypothetical protein | |
24 | YPA_0771 | 887882..888352 [+], 471 | 108806768 | hypothetical protein | |
25 | YPA_0772 | 888817..888954 [-], 138 | 108806769 | putative transposase | |
26 | YPA_0773 | 889085..889405 [-], 321 | 108806770 | putative transposase | |
27 | YPA_0774 | 889514..889687 [-], 174 | 108806771 | IS630 orf | |
28 | YPA_0775 | 890517..891749 [+], 1233 | 108806772 | hypothetical protein | |
29 | YPA_0776 | 891746..895168 [+], 3423 | 108806773 | hypothetical protein | TssM |
30 | YPA_0777 | 895212..896498 [+], 1287 | 108806774 | hypothetical protein | TssA |
31 | YPA_0778 | 896550..896813 [+], 264 | 108806775 | hypothetical protein | |
32 | YPA_0779 | 896831..897889 [+], 1059 | 108806776 | hypothetical protein | PAAR |
33 | YPA_0780 | 897904..898359 [+], 456 | 108806777 | hypothetical protein | |
34 | YPA_0781 | 898580..900343 [+], 1764 | 108806778 | hypothetical protein | TssF |
35 | YPA_0782 | 900307..901392 [+], 1086 | 108806779 | hypothetical protein | TssG |
36 | YPA_0783 | 901268..901948 [+], 681 | 108806780 | hypothetical protein | TssJ |
37 | YPA_0784 | 901948..902400 [+], 453 | 108806781 | hypothetical protein | TssE |
38 | YPA_0785 | 902425..903792 [+], 1368 | 108806782 | hypothetical protein | TssA |
39 | YPA_0786 | 904004..904627 [-], 624 | 108806783 | hypothetical protein | |
40 | YPA_0787 | 905142..906905 [+], 1764 | 108806784 | ABC transporter ATP-binding protein | |
41 | YPA_0788 | 907133..907786 [+], 654 | 108806785 | hypothetical protein | |
42 | YPA_0789 | 907830..909038 [-], 1209 | 108806786 | transposase for the IS285 insertion element | |
43 | YPA_0790 | 909174..909944 [-], 771 | 108806787 | molybdopterin biosynthesis protein MoeB | |
44 | YPA_0791 | 909946..911220 [-], 1275 | 108806788 | molybdopterin biosynthesis protein MoeA | |
45 | YPA_0792 | 911755..913065 [-], 1311 | 108806789 | putative heme-binding protein | |
46 | YPA_0793 | 913075..913743 [-], 669 | 108806790 | ABC transporter ATP-binding protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein