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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | YE2674 | 2899520..2900692 [+], 1173 | 123442890 | hypothetical protein | |
2 | YE2675 | 2900763..2901524 [-], 762 | 123442891 | DeoR family regulatory protein | |
3 | YE2676 | 2901629..2902438 [-], 810 | 123442892 | putative haloacid dehalogenase-like hydrolase | |
4 | YE2677 | 2902618..2903457 [-], 840 | 123442893 | hypothetical protein | |
5 | YE2678 | 2903500..2905104 [-], 1605 | 123442894 | putative phosphotransferase system protein | |
6 | YE2679 | 2905488..2906885 [-], 1398 | 123442895 | hypothetical protein | |
7 | YE2680 (argG) | 2907123..2908487 [+], 1365 | 123442896 | argininosuccinate synthase | |
8 | YE2681 | 2908619..2909098 [-], 480 | 123442897 | hypothetical protein | TssE |
9 | YE2682 | 2909098..2909925 [-], 828 | 123442898 | hypothetical protein | TagJ |
10 | YE2683 | 2909951..2910793 [-], 843 | 123442899 | hypothetical protein | |
11 | YE2684 | 2911171..2913885 [-], 2715 | 123442900 | hypothetical protein | TssI |
12 | YE2685 | 2914034..2917867 [-], 3834 | 123442901 | hypothetical protein | TssM |
13 | YE2686 | 2917876..2919252 [-], 1377 | 123442902 | putative OmpA family protein | TssL |
14 | YE2687 | 2919249..2920598 [-], 1350 | 123442903 | hypothetical protein | TssK |
15 | YE2688 | 2920602..2921153 [-], 552 | 123442904 | hypothetical protein | TssJ |
16 | YE2689 | 2921360..2921845 [-], 486 | 123442905 | hypothetical protein | TssD |
17 | YE2690 | 2922177..2923604 [-], 1428 | 123442906 | hypothetical protein | TssC |
18 | YE2691 | 2923697..2924221 [-], 525 | 123442907 | hypothetical protein | TssB |
19 | YE2692 | 2924326..2924928 [-], 603 | 123442908 | fimbrial protein | |
20 | YE2693 | 2924913..2927588 [-], 2676 | 123442909 | outer membrane usher protein | |
21 | YE2694 | 2927692..2928489 [-], 798 | 123442910 | putative pili chaperone protein | |
22 | YE2695 | 2928597..2929157 [-], 561 | 123442911 | frimbrial protein | |
23 | YE2696 (clpB5) | 2929324..2931996 [-], 2673 | 123442912 | Clp ATPase | TssH |
24 | YE2697 | 2932716..2934596 [+], 1881 | 123442913 | hypothetical protein | TssF |
25 | YE2698 | 2934596..2935621 [+], 1026 | 123442914 | hypothetical protein | TssG |
26 | YE2699 | 2935696..2936859 [+], 1164 | 123442915 | hypothetical protein | TssA |
27 | YE2700 | 2936866..2937870 [+], 1005 | 123442916 | putative fimbrial protein | |
28 | YE2701 | 2937909..2939246 [+], 1338 | 123442917 | hypothetical protein | |
29 | YE2702 | 2939243..2939890 [+], 648 | 123442918 | hypothetical protein | |
30 | YE2703 | 2939891..2941561 [+], 1671 | 123442919 | hypothetical protein | TagL |
31 | YE2704 | 2941568..2942053 [+], 486 | 123442920 | hypothetical protein | |
32 | YE2705 | 2942187..2942789 [-], 603 | 123442921 | LuxR family regulatory protein | |
33 | YE2707 (cobT) | 2944349..2945407 [-], 1059 | 123442922 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | |
34 | YE2708 (cobC) | 2945430..2946062 [-], 633 | 123442923 | alpha-ribazole-5'-phosphate phosphatase | |
35 | YE2709 (cobS) | 2946100..2946846 [-], 747 | 123442924 | cobalamin synthase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein