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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BMA10247_A2170 | 2104870..2105250 [-], 381 | 126447899 | hypothetical protein | |
2 | BMA10247_A2171 | 2105291..2105950 [-], 660 | 126445896 | hypothetical protein | |
3 | BMA10247_A2173 | 2107211..2109688 [-], 2478 | 126447556 | pentapeptide repeat-containing protein | |
4 | BMA10247_A2174 | 2109720..2112047 [-], 2328 | 126445657 | Rhs element Vgr protein | TssI |
5 | BMA10247_A2175 | 2112119..2113156 [-], 1038 | 262192881 | ImpA-related N-terminal family protein | TssA |
6 | BMA10247_A2176 | 2113219..2114304 [-], 1086 | 126447347 | SciB protein | TssG |
7 | BMA10247_A2177 | 2114304..2116193 [-], 1890 | 126447879 | hypothetical protein | TssF |
8 | BMA10247_A2178 | 2116224..2116805 [-], 582 | 126446180 | hypothetical protein | TssE |
9 | BMA10247_A2179 | 2116792..2117757 [-], 966 | 126447594 | ImpE/SciE family protein | TagJ |
10 | BMA10247_A2180 | 2117754..2118500 [-], 747 | 126447054 | hypothetical protein | |
11 | BMA10247_A2183 | 2121965..2122546 [+], 582 | 126445708 | hypothetical protein | TssB |
12 | BMA10247_A2184 | 2122581..2124080 [+], 1500 | 126447950 | hypothetical protein | TssC |
13 | BMA10247_A2186 | 2124197..2124682 [+], 486 | 126446315 | hypothetical protein | TssD |
14 | BMA10247_A2185 | 2124660..2124776 [-], 117 | 126447074 | hypothetical protein | |
15 | BMA10247_A2187 (sciN) | 2124789..2125292 [+], 504 | 126446927 | SciN protein | TssJ |
16 | BMA10247_A2188 | 2125314..2126660 [+], 1347 | 126446378 | hypothetical protein | TssK |
17 | BMA10247_A2189 | 2126749..2128014 [+], 1266 | 126447715 | hypothetical protein | TssL |
18 | BMA10247_A2192 | 2132138..2132368 [+], 231 | 126446185 | hypothetical protein | |
19 | BMA10247_A2193 | 2132684..2132833 [-], 150 | 126447373 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein