I. Summary
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 |
Component | TssG | TssJ | TssK | TssM |
Number | 1 | 1 | 1 | 1 |
 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PSPA7_0145 | 156649..159747 [-], 3099 | 152984686 | serine/threonine protein kinase PpkA | PpkA |
2 | PSPA7_0146 | 159755..160483 [-], 729 | 152986292 | putative phosphoprotein phosphatase | PppA |
3 | PSPA7_0147 | 160493..161173 [-], 681 | 152987384 | hypothetical protein | TagF |
4 | PSPA7_0148 | 161170..164700 [-], 3531 | 152984454 | hypothetical protein | TssM |
5 | PSPA7_0149 | 164697..166046 [-], 1350 | 152985769 | hypothetical protein | TssL |
6 | PSPA7_0150 | 166053..167387 [-], 1335 | 152988561 | hypothetical protein | TssK |
7 | PSPA7_0151 | 167404..167868 [-], 465 | 152985140 | putative lipoprotein | TssJ |
8 | PSPA7_0152 | 167913..169439 [-], 1527 | 152985795 | hypothetical protein | Fha |
9 | PSPA7_0153 | 169449..169592 [+], 144 | 152989219 | hypothetical protein | |
10 | PSPA7_0154 | 169807..170838 [+], 1032 | 152984264 | hypothetical protein | TssA |
11 | PSPA7_0155 | 170927..171445 [+], 519 | 152983480 | hypothetical protein | TssB |
12 | PSPA7_0156 | 171458..172954 [+], 1497 | 152984184 | hypothetical protein | TssC |
13 | PSPA7_0157 | 173030..173518 [+], 489 | 152985902 | hypothetical protein | TssD |
14 | PSPA7_0158 | 173677..174462 [+], 786 | 152988565 | virulence protein, SciE type | TagJ |
15 | PSPA7_0159 | 174464..174973 [+], 510 | 152984195 | hypothetical protein | TssE |
16 | PSPA7_0160 | 174970..176829 [+], 1860 | 152988188 | hypothetical protein | TssF |
17 | PSPA7_0161 | 176793..177839 [+], 1047 | 152986386 | hypothetical protein | TssG |
18 | PSPA7_0162 | 177832..180540 [+], 2709 | 152989614 | type VI secretion ATPase | TssH |
19 | PSPA7_0163 | 180575..182515 [+], 1941 | 152987570 | hypothetical protein | TssI |
20 | PSPA7_0164 | 182522..182635 [-], 114 | 152987514 | hypothetical protein | |
21 | PSPA7_0165 | 182642..182767 [-], 126 | 152986670 | hypothetical protein | |
22 | PSPA7_0166 | 182778..183311 [-], 534 | 152986602 | hypothetical protein | |
23 | PSPA7_0167 | 183308..184612 [-], 1305 | 152985744 | PAAR motif-containing protein | Tse6 (e) |
24 | PSPA7_0168 | 184628..185062 [-], 435 | 152987036 | hypothetical protein | |
25 | PSPA7_0169 | 185315..187540 [+], 2226 | 152983873 | hypothetical protein | TssI |
26 | PSPA7_0170 | 187569..188018 [+], 450 | 152986466 | hypothetical protein | |
27 | PSPA7_0171 | 188035..189147 [+], 1113 | 152985103 | hypothetical protein | |
28 | PSPA7_0172 | 189144..190181 [+], 1038 | 152986846 | 3-oxoacyl-(acyl carrier protein) synthase | |
29 | PSPA7_0173 | 190181..191344 [+], 1164 | 152989562 | hypothetical protein | |
30 | PSPA7_0174 | 191721..192281 [+], 561 | 152984217 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.