 |
| III. genome coordinates of the T6SS gene cluster |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
| 1 | YPSIP31758_RS13705 (moeB) | 2803334..2804104 [+], 771 | 488140740 | molybdopterin-synthase adenylyltransferase MoeB | |
| 2 | YPSIP31758_RS13710 | 2804176..2804823 [-], 648 | 501053800 | hypothetical protein | |
| 3 | YPSIP31758_RS13715 | 2805041..2806636 [-], 1596 | 501053801 | ABC-F family ATPase | |
| 4 | YPSIP31758_RS13720 | 2807319..2807942 [+], 624 | 501053802 | hypothetical protein | |
| 5 | YPSIP31758_RS13725 | 2808154..2809521 [-], 1368 | 501053803 | type VI secretion system ImpA family N-terminal domain-containing protein | |
| 6 | YPSIP31758_RS13730 (tssE) | 2809545..2809997 [-], 453 | 488140735 | type VI secretion system baseplate subunit TssE | |
| 7 | YPSIP31758_RS13735 (tssJ) | 2809997..2810578 [-], 582 | 501053804 | type VI secretion system lipoprotein TssJ | |
| 8 | YPSIP31758_RS13740 (tssG) | 2810553..2811638 [-], 1086 | 501053805 | type VI secretion system baseplate subunit TssG | |
| 9 | YPSIP31758_RS13745 (tssF) | 2811602..2813365 [-], 1764 | 501053806 | type VI secretion system baseplate subunit TssF | |
| 10 | YPSIP31758_RS13750 | 2813457..2813915 [-], 459 | 501053808 | DUF943 family protein | |
| 11 | YPSIP31758_RS13755 | 2813918..2815033 [-], 1116 | 501053809 | DUF3289 family protein | |
| 12 | YPSIP31758_RS13760 (tssA) | 2815051..2816652 [-], 1602 | 501053810 | type VI secretion system protein TssA | |
| 13 | YPSIP31758_RS13765 | 2816697..2817482 [-], 786 | 908574201 | hypothetical protein | |
| 14 | YPSIP31758_RS13770 | 2817531..2820572 [-], 3042 | 501053812 | hypothetical protein | |
| 15 | YPSIP31758_RS13775 | 2820654..2824076 [-], 3423 | 501053813 | type VI secretion system membrane subunit | |
| 16 | YPSIP31758_RS13780 | 2824073..2825305 [-], 1233 | 501053814 | hypothetical protein | |
| 17 | YPSIP31758_RS23360 | 2826135..2826930 [+], 796 | pseudogene | transposase | |
| 18 | YPSIP31758_RS13790 | 2827470..2828117 [-], 648 | 727730705 | hypothetical protein | |
| 19 | YPSIP31758_RS13795 | 2828114..2829738 [-], 1625 | pseudogene | M23 family metallopeptidase | |
| 20 | YPSIP31758_RS13800 | 2829754..2830014 [-], 261 | 501053818 | DUF2345 domain-containing protein | |
| 21 | YPSIP31758_RS13805 | 2830168..2830941 [-], 774 | 488140722 | hypothetical protein | |
| 22 | YPSIP31758_RS13810 | 2830938..2833238 [-], 2301 | 501053819 | M23 family metallopeptidase | |
| 23 | YPSIP31758_RS13815 | 2833254..2835602 [-], 2349 | 501053820 | type VI secretion system tip protein VgrG | |
| 24 | YPSIP31758_RS13820 (tssH) | 2835605..2838247 [-], 2643 | 501053821 | type VI secretion system ATPase TssH | |
| 25 | YPSIP31758_RS13825 | 2838541..2839032 [-], 492 | 488138806 | Hcp family type VI secretion system effector | |
| 26 | YPSIP31758_RS13830 | 2839036..2840772 [-], 1737 | 501053822 | OmpA family protein | |
| 27 | YPSIP31758_RS13835 | 2840772..2841458 [-], 687 | 501053823 | type VI secretion system protein TssL, short form | |
| 28 | YPSIP31758_RS13840 (tssK) | 2841455..2842807 [-], 1353 | 488151639 | type VI secretion system baseplate subunit TssK | |
| 29 | YPSIP31758_RS13845 (tssC) | 2842819..2844369 [-], 1551 | 501053003 | type VI secretion system contractile sheath large subunit | |
| 30 | YPSIP31758_RS13850 (tssB) | 2844412..2844912 [-], 501 | 488140454 | type VI secretion system contractile sheath small subunit | |
| 31 | YPSIP31758_RS13860 | 2845901..2846749 [-], 849 | 488141808 | ACP S-malonyltransferase | |
| 32 | YPSIP31758_RS13865 | 2846848..2847096 [-], 249 | 488141809 | acyl carrier protein | |
| 33 | YPSIP31758_RS13870 | 2847134..2847574 [-], 441 | 488157362 | lipocalin-like domain-containing protein | |
| 34 | YPSIP31758_RS13875 | 2847661..2848449 [-], 789 | 501053824 | SDR family oxidoreductase | |
| 35 | YPSIP31758_RS13880 | 2848452..2849204 [-], 753 | 488141817 | enoyl-CoA hydratase/isomerase family protein | |
| |
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
SecReT6 ID
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein