SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	224
Strain	Yersinia pseudotuberculosis IP 31758
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_009708
Location	2808154..2844912
Comment
Function	N/A
T6SS Type	Type i; subtype i2
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	1	2	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	YpsIP31758_2481 (moeB)	2803334..2804104 [+], 771	153950195	molybdopterin biosynthesis protein MoeB
2	YpsIP31758_2482	2804176..2804823 [-], 648	153949587	hypothetical protein
3	YpsIP31758_2483	2805041..2806636 [-], 1596	153949013	ABC transporter ATP-binding protein
4	YpsIP31758_2484	2807319..2807942 [+], 624	153948650	hypothetical protein
5	YpsIP31758_2485	2808154..2809521 [-], 1368	153948566	ImpA domain-containing protein	TssA
6	YpsIP31758_2486	2809545..2809997 [-], 453	153947844	hypothetical protein	TssE
7	YpsIP31758_2487	2809997..2810578 [-], 582	153947257	hypothetical protein	TssJ
8	YpsIP31758_2488	2810553..2811638 [-], 1086	153950062	hypothetical protein	TssG
9	YpsIP31758_2489	2811602..2813365 [-], 1764	153950468	hypothetical protein	TssF
10	YpsIP31758_2490	2813457..2813915 [-], 459	153950705	hypothetical protein
11	YpsIP31758_2491	2813918..2815033 [-], 1116	153949427	hypothetical protein	PAAR
12	YpsIP31758_2492	2815051..2816652 [-], 1602	153947187	ImpA domain-containing protein	TssA
13	YpsIP31758_2493	2816697..2817518 [-], 822	153950131	hypothetical protein
14	YpsIP31758_2494	2817531..2820572 [-], 3042	153950521	hypothetical protein
15	YpsIP31758_2495	2820654..2824076 [-], 3423	153948949	hypothetical protein	TssM
16	YpsIP31758_2496	2824073..2825305 [-], 1233	153949859	hypothetical protein
17	YpsIP31758_2498	2827251..2827418 [-], 168	153947988	hypothetical protein
18	YpsIP31758_2499	2828017..2828238 [+], 222	153948602	hypothetical protein
19	YpsIP31758_2500	2828245..2829738 [-], 1494	153947112	M23 peptidase domain-containing protein
20	YpsIP31758_2501	2829754..2830014 [-], 261	153947687	hypothetical protein
21	YpsIP31758_2502	2830168..2830941 [-], 774	153950057	hypothetical protein
22	YpsIP31758_2503	2830938..2833238 [-], 2301	153947205	M23 peptidase domain-containing protein
23	YpsIP31758_2504	2833254..2835602 [-], 2349	153948683	Rhs element Vgr protein	TssI
24	YpsIP31758_2505	2835605..2838247 [-], 2643	153948469	AAA ATPase	TssH
25	YpsIP31758_2506	2838541..2839032 [-], 492	153947895	hypothetical protein	TssD
26	YpsIP31758_2507	2839036..2840772 [-], 1737	153949846	OmpA domain-containing protein	TagL
27	YpsIP31758_2508	2840772..2841458 [-], 687	153949263	hypothetical protein	TssL
28	YpsIP31758_2509	2841455..2842807 [-], 1353	153949289	hypothetical protein	TssK
29	YpsIP31758_2510	2842819..2844369 [-], 1551	153950793	hypothetical protein	TssC
30	YpsIP31758_2511	2844412..2844912 [-], 501	153950174	hypothetical protein	TssB
31	YpsIP31758_2512	2845901..2846749 [-], 849	153950287	acyltransferase
32	YpsIP31758_2513	2846848..2847096 [-], 249	153950570	acyl carrier protein
33	YpsIP31758_2514	2847134..2847574 [-], 441	153949209	hypothetical protein
34	YpsIP31758_2515	2847661..2848449 [-], 789	153948064	hypothetical protein
35	YpsIP31758_2516	2848452..2849204 [-], 753	153948254	polyketide biosynthesis enoyl-CoA hydratase

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

Homology Effector list

EC042_4529

Effector identified
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Homolog
1	YpsIP31758_2506	2838541..2839032 [-], 492	153947895	hypothetical protein	EC042_4529

Download FASTA format files

Proteins Genes

N/A