I. Summary
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 1 | 1 |
Component | TssG | TssJ | TssK | TssM |
Number | 1 | 1 | 1 | 1 |
 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | EcHS_A0221 | 236738..236887 [-], 150 | 157159677 | hypothetical protein | |
2 | EcHS_A0222 | 236933..237718 [+], 786 | 157159678 | lipoprotein | |
3 | EcHS_A0223 | 238344..239258 [-], 915 | 157159679 | hypothetical protein | |
4 | EcHS_A0224 | 239302..239784 [-], 483 | 157159680 | hypothetical protein | TssD |
5 | EcHS_A0225 | 239808..241160 [-], 1353 | 157159681 | ImpA domain-containing protein | TssA |
6 | EcHS_A0226 | 241171..244695 [-], 3525 | 157159682 | hypothetical protein | TssM |
7 | EcHS_A0227 | 244714..246126 [-], 1413 | 157159683 | ImpA domain-containing protein | TssA |
8 | EcHS_A0228 | 246131..246874 [-], 744 | 157159684 | type VI secretion-associated protein | |
9 | EcHS_A0229 (clpV) | 246871..249642 [-], 2772 | 157159685 | type VI secretion ATPase | TssH |
10 | EcHS_A0230 | 249651..250412 [-], 762 | 157159686 | hypothetical protein | TssL |
11 | EcHS_A0231 | 250417..251748 [-], 1332 | 157159687 | hypothetical protein | TssK |
12 | EcHS_A0232 | 251751..252275 [-], 525 | 157159688 | type VI secretion lipoprotein | TssJ |
13 | EcHS_A0233 | 252272..253552 [-], 1281 | 157159689 | hypothetical protein | Fha |
14 | EcHS_A0234 | 253577..254659 [-], 1083 | 157159690 | hypothetical protein | TssG |
15 | EcHS_A0235 | 254623..256473 [-], 1851 | 157159691 | hypothetical protein | TssF |
16 | EcHS_A0236 | 256477..256890 [-], 414 | 157159692 | hypothetical protein | TssE |
17 | EcHS_A0237 | 256897..258372 [-], 1476 | 157159693 | hypothetical protein | TssC |
18 | EcHS_A0238 | 258423..258647 [-], 225 | 157159694 | hypothetical protein | TssC |
19 | EcHS_A0239 | 258682..259182 [-], 501 | 157159695 | hypothetical protein | TssB |
20 | EcHS_A0240 | 259609..259752 [+], 144 | 157159696 | hypothetical protein | |
21 | EcHS_A0241 | 259879..260397 [+], 519 | 157159697 | hypothetical protein | TssD |
22 | EcHS_A0242 | 260430..260567 [+], 138 | 157159698 | hypothetical protein | |
23 | EcHS_A0243 | 260607..262748 [+], 2142 | 157159699 | type VI secretion system Vgr family protein | TssI |
24 | EcHS_A0244 (rhsH) | 262824..267077 [+], 4254 | 157159700 | protein RhsH | PAAR |
25 | EcHS_A0245 | 267089..267538 [+], 450 | 157159701 | hypothetical protein | |
|

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.